Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC024224.1-201ENST00000538284 609 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.67□□□□□ -2.14
VCX3BQ9H321 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.67□□□□□ -2.14
VCX3BQ9H321 AL031274.2-201ENST00000599419 203 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 AC026741.1-201ENST00000605892 482 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 TUG1_1.1-201ENST00000610654 145 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 MIR6130-201ENST00000619419 109 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 HPVC1-201ENST00000629899 1198 ntBASIC1.67□□□□□ -2.14
VCX3BQ9H321 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VCX3BQ9H321 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3BQ9H321 RNU6-492P-201ENST00000363035 104 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3BQ9H321 U6.112-201ENST00000384129 70 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 MIR514A1-201ENST00000385133 98 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 RN7SKP51-201ENST00000410781 304 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 RNU2-63P-201ENST00000410792 194 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 RPS24P7-201ENST00000416921 246 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC019178.2-201ENST00000423595 505 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC007742.1-201ENST00000425789 329 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 MTND2P5-201ENST00000432656 1006 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 ELOCP26-201ENST00000436067 329 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AL158053.1-201ENST00000441503 453 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VCX3BQ9H321 USP9YP15-201ENST00000442391 422 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 SUMO2P2-201ENST00000456482 255 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC234778.2-201ENST00000566241 354 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC012435.1-202ENST00000568772 240 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AL451007.1-201ENST00000595491 289 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 RPAP2P1-201ENST00000603626 1168 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 SNRPGP19-201ENST00000603826 189 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AL138963.2-201ENST00000605137 226 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 AL442067.2-201ENST00000614033 363 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 U6.101-201ENST00000637707 76 ntBASIC1.66□□□□□ -2.14
VCX3BQ9H321 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.66□□□□□ -2.14
VCX3BQ9H321 MTND5P6-201ENST00000422338 1798 ntBASIC1.65□□□□□ -2.14
VCX3BQ9H321 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VCX3BQ9H321 AL589826.1-201ENST00000340697 249 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 RNU6-1066P-201ENST00000363573 105 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 MIR134-201ENST00000385258 73 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VCX3BQ9H321 LUZP4P1-201ENST00000415420 344 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 ZNF863P-201ENST00000426746 417 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC092017.2-201ENST00000427600 362 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC009238.1-201ENST00000442165 424 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC009237.6-201ENST00000446969 424 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AL109933.2-201ENST00000452651 260 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 FTH1P2-201ENST00000466086 412 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VCX3BQ9H321 HMGB1P35-201ENST00000503360 598 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC021146.2-201ENST00000504736 556 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC023632.1-201ENST00000518463 375 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AP001646.1-201ENST00000527936 915 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 AL354943.1-201ENST00000572103 781 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC007151.1-201ENST00000572774 483 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 MIR4713-201ENST00000582691 75 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AP001542.2-201ENST00000593141 364 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 DUXAP11-201ENST00000603858 526 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC007349.4-201ENST00000608114 532 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 DUXAP10-204ENST00000612052 616 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 MIR6810-201ENST00000622701 70 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC007998.5-201ENST00000622938 237 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
VCX3BQ9H321 AL163152.1-201ENST00000642001 374 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
VCX3BQ9H321 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.64□□□□□ -2.15
VCX3BQ9H321 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.64□□□□□ -2.15
VCX3BQ9H321 RNU6-609P-201ENST00000365459 107 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 RNU6-741P-201ENST00000383889 107 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 RPL22P22-201ENST00000395439 379 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 NDUFS5P1-201ENST00000405668 289 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
VCX3BQ9H321 RNU6-955P-201ENST00000410497 104 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 MTCYBP15-201ENST00000433123 1127 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC092393.1-201ENST00000439625 742 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.64□□□□□ -2.15
VCX3BQ9H321 AL353691.1-201ENST00000451332 387 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 RNU4-29P-201ENST00000515943 174 ntBASIC1.64□□□□□ -2.15
VCX3BQ9H321 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms