Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 SNORA20.2-201ENST00000383922 131 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 RNU6-456P-201ENST00000384493 107 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS16Q9H269 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 AL356432.1-201ENST00000405809 419 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 RNA5SP118-201ENST00000410385 109 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 RNA5SP107-201ENST00000411358 122 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AL354751.2-201ENST00000415471 210 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS16Q9H269 RPL17P36-201ENST00000420302 549 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AL606489.2-201ENST00000433886 234 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 CYCSP43-201ENST00000438233 310 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 SEPT14P3-201ENST00000439401 183 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC005094.1-201ENST00000440420 368 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AL732372.2-207ENST00000445840 183 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS16Q9H269 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS16Q9H269 SEPT14P2-201ENST00000453405 183 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AL049714.1-201ENST00000466686 347 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 RPL23AP55-201ENST00000498163 452 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC117522.3-201ENST00000507974 584 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 SEPT14P4-201ENST00000513445 186 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 SNORA31.8-201ENST00000516327 108 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 MIR2276-201ENST00000516886 89 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 RNU6-64P-201ENST00000517119 105 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS16Q9H269 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS16Q9H269 AC100870.1-201ENST00000522035 505 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 FO082796.1-201ENST00000523795 183 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS16Q9H269 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS16Q9H269 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.85□□□□□ -1.79
VPS16Q9H269 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS16Q9H269 AC055876.1-202ENST00000567053 138 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC011712.1-201ENST00000588959 234 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC006116.10-201ENST00000591836 581 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC022432.1-201ENST00000595739 310 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 AC048347.1-201ENST00000624621 427 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS16Q9H269 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 CKAP2P1-201ENST00000555477 2049 ntBASIC3.85□□□□□ -1.79
VPS16Q9H269 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS16Q9H269 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS16Q9H269 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS16Q9H269 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
VPS16Q9H269 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS16Q9H269 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS16Q9H269 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VPS16Q9H269 DEFB108F-201ENST00000344638 222 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 U3.11-201ENST00000364476 212 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS16Q9H269 RNU6-1158P-201ENST00000391167 107 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RNU6-1068P-201ENST00000410958 103 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RNU6-55P-201ENST00000411092 107 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RNU6-954P-201ENST00000411355 107 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RPL21P24-201ENST00000413752 448 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 MRPL50P2-201ENST00000416821 482 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 ELOCP4-201ENST00000420090 333 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AC007283.2-201ENST00000424739 197 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 MTCO3P45-201ENST00000443036 613 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AC016696.1-201ENST00000446949 318 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS16Q9H269 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RN7SL330P-201ENST00000469709 307 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RN7SL594P-201ENST00000470590 287 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AC114797.1-201ENST00000514003 728 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 RNU2-10P-201ENST00000516375 211 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 SNORA31.22-201ENST00000517204 135 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.84□□□□□ -1.79
VPS16Q9H269 ERHP1-201ENST00000523006 310 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 OR5B19P-201ENST00000531766 928 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS16Q9H269 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AC015917.1-201ENST00000579654 510 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AF038458.1-201ENST00000588406 262 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AP001330.4-201ENST00000604350 154 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS16Q9H269 AC005858.4-201ENST00000623191 700 ntBASIC3.84□□□□□ -1.79
VPS16Q9H269 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS16Q9H269 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS16Q9H269 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
VPS16Q9H269 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS16Q9H269 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS16Q9H269 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
VPS16Q9H269 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS16Q9H269 SNORD9-201ENST00000362566 104 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 RNU6-169P-201ENST00000365336 107 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS16Q9H269 SNORA69-201ENST00000383895 132 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS16Q9H269 TXNP7-201ENST00000406296 293 ntBASIC3.83□□□□□ -1.8
VPS16Q9H269 MIR1193-201ENST00000408109 78 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms