Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MYL8P-204ENST00000431574 518 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC004938.1-201ENST00000438468 308 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AL138752.1-201ENST00000452964 351 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AL139109.1-201ENST00000455491 297 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 RNA5SP464-201ENST00000516251 108 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 RNU6-911P-201ENST00000516523 104 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC130289.1-201ENST00000577321 73 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AL713866.2-201ENST00000603579 219 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC007619.2-201ENST00000605743 379 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC006023.2-201ENST00000609916 167 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 MIR6130-201ENST00000619419 109 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 AC009229.4-201ENST00000623854 1947 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 OR14L1P-202ENST00000641545 3009 ntBASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSBP3Q9BWW4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MAPK10-320ENST00000641462 6696 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AP000756.2-201ENST00000624168 2567 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RNU6-371P-201ENST00000364283 108 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RNU6-1303P-201ENST00000364841 107 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 SNORA70F-201ENST00000384142 135 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RNU6-339P-201ENST00000384310 107 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MT-TC-201ENST00000387405 66 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RNA5SP332-201ENST00000391063 115 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 SNORA68.2-201ENST00000391263 128 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RNA5SP397-201ENST00000391323 118 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ENSAP1-201ENST00000392855 326 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 GLULP6-201ENST00000399502 913 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RPL21P90-201ENST00000415692 466 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC073587.1-201ENST00000447093 876 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RPL21P41-201ENST00000459863 264 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 RAB9BP1-201ENST00000519581 626 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC004584.2-201ENST00000570407 410 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC067852.3-201ENST00000589177 561 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC012669.1-201ENST00000603209 283 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MIR1244-1-201ENST00000612829 85 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AC116447.1-201ENST00000613153 453 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MIR7703-201ENST00000620784 77 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 U3.53-201ENST00000628922 216 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MIR1244-3-201ENST00000635744 85 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MIR1244-2-201ENST00000636449 85 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MIR1244-4-202ENST00000636813 85 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 AL445487.1-201ENST00000415694 1580 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSBP3Q9BWW4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 MIR335-201ENST00000362173 94 ntBASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 RNU6-288P-201ENST00000363690 104 ntBASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 SNORD113.2-201ENST00000364166 89 ntBASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 RNU6-886P-201ENST00000384319 105 ntBASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 Y_RNA.539-201ENST00000384635 107 ntBASIC3.87□□□□□ -1.79
SSBP3Q9BWW4 SNORD73A-201ENST00000386062 65 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms