Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SSXP1-201ENST00000453640 473 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 AC060788.1-201ENST00000521318 469 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 AL451007.1-201ENST00000595491 289 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 OR2AS2P-201ENST00000606902 342 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 OR5H6-203ENST00000642105 978 ntBASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.85□□□□□ -1.95
CCM2Q9BSQ5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 RNU6-799P-201ENST00000363567 107 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 SNORD115.1-201ENST00000391109 76 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 MRPL42P2-201ENST00000403169 426 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 Y_RNA.598-201ENST00000410480 95 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 RNU2-62P-201ENST00000410868 191 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AL513331.1-201ENST00000411908 397 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 RPS15AP12-201ENST00000419498 388 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AL451054.2-201ENST00000420896 202 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC090960.1-201ENST00000421072 306 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC006366.1-201ENST00000422002 759 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 CYCSP46-201ENST00000423569 204 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 RPL21P41-201ENST00000459863 264 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 RPS3AP14-201ENST00000483907 780 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC107934.1-201ENST00000522215 217 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC079089.3-201ENST00000603094 673 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC112191.3-201ENST00000604371 277 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC006338.1-201ENST00000618453 749 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC009878.1-201ENST00000621819 340 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 AC025048.6-202ENST00000627667 438 ntBASIC2.84□□□□□ -1.95
CCM2Q9BSQ5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.84□□□□□ -1.96
CCM2Q9BSQ5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCM2Q9BSQ5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCM2Q9BSQ5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.84□□□□□ -1.96
CCM2Q9BSQ5 AC010733.2-201ENST00000589496 5702 ntBASIC2.84□□□□□ -1.96
CCM2Q9BSQ5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNU1-35P-201ENST00000362782 153 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNU4-21P-201ENST00000362802 126 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNU6-525P-201ENST00000363685 104 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 BTF3L4P3-201ENST00000418879 476 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AL139132.1-201ENST00000431587 344 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 PIGFP3-201ENST00000441918 722 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 SNRPGP6-201ENST00000451124 220 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 SNRPGP9-201ENST00000456025 225 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RPS29P26-201ENST00000477483 171 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 LARP1BP2-201ENST00000486594 519 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 FABP5P5-201ENST00000515537 406 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNA5SP291-201ENST00000517222 105 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AP003181.2-201ENST00000528941 181 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC022878.1-201ENST00000530684 149 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 MIR3118-1-201ENST00000581787 76 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 MIR3609-201ENST00000582661 80 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 MIR4293-201ENST00000584305 78 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AL590229.1-201ENST00000603497 542 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 RNU6-87P-201ENST00000607561 108 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC239868.4-201ENST00000608318 671 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 BX664608.1-201ENST00000610519 487 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC073114.1-201ENST00000612027 490 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC091953.2-201ENST00000623979 160 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC007785.2-201ENST00000598627 1916 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 AC092104.1-201ENST00000497346 1441 ntBASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CCM2Q9BSQ5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms