Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC093663.1-201ENST00000497190 394 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC010265.1-201ENST00000513509 211 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AP002963.1-201ENST00000530590 184 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 Z84480.1-201ENST00000605131 311 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL121992.2-201ENST00000606262 256 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AL139286.2-201ENST00000606838 396 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC107294.3-201ENST00000609211 526 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC100793.4-201ENST00000613683 429 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 AC011939.3-201ENST00000613686 466 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 MTND4P35-201ENST00000604257 1375 ntBASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HERPUD2Q9BSE4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-108P-201ENST00000365558 107 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 RNU1-73P-201ENST00000383971 164 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 SNORA24.1-201ENST00000384401 135 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-456P-201ENST00000384493 107 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 EI24P2-201ENST00000397776 1076 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 DEFB108C-201ENST00000400154 252 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL365496.1-201ENST00000426885 215 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 HMGB1P9-201ENST00000429856 646 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL358934.1-201ENST00000432346 324 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 MTCO2P18-201ENST00000457151 658 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC128713.1-201ENST00000471495 306 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC126182.1-201ENST00000478134 357 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 RPS27P26-201ENST00000494583 239 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 SUMO2P6-201ENST00000505273 288 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC010493.1-201ENST00000513479 292 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC024909.2-201ENST00000553035 286 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL359212.1-201ENST00000556608 614 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL845331.3-202ENST00000562856 261 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AL589743.7-201ENST00000612637 233 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC099842.1-201ENST00000619919 596 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC138649.3-201ENST00000622154 254 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC092656.1-203ENST00000624134 423 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HERPUD2Q9BSE4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 RNU6-181P-201ENST00000363225 107 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL645937.1-202ENST00000421799 937 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC091286.1-201ENST00000431233 461 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 ATP5JP1-201ENST00000431631 322 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL591704.1-201ENST00000432574 275 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC008264.1-201ENST00000447612 367 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC079448.1-201ENST00000449377 373 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 C1DP4-201ENST00000455429 424 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC106707.2-201ENST00000484182 374 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC023194.1-201ENST00000493084 308 ntBASIC3.59□□□□□ -1.83
HERPUD2Q9BSE4 AC139453.3-201ENST00000493276 369 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms