Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC008379.1-201ENST00000463655 464 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 FAM133DP-201ENST00000464802 691 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC011825.1-201ENST00000484967 388 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC104581.2-201ENST00000572227 430 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC026271.5-201ENST00000577873 130 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 GAS5-AS1-201ENST00000602767 694 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC026790.2-201ENST00000606282 430 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 TUG1_1.1-201ENST00000610654 145 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 MIR7106-201ENST00000612419 65 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
VPS25Q9BRG1 AC083865.1-201ENST00000636634 831 ntBASIC1.09□□□□□ -2.23
VPS25Q9BRG1 SEC63P2-201ENST00000503863 1939 ntBASIC1.09□□□□□ -2.24
VPS25Q9BRG1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC062016.1-201ENST00000355719 319 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 SNORA36C-201ENST00000384289 132 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 RNU6-1005P-201ENST00000384519 107 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 MIR95-201ENST00000385072 81 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 RPL23AP29-201ENST00000397284 453 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AL031679.1-201ENST00000400616 525 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 Z98742.2-201ENST00000431564 187 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC079448.1-201ENST00000449377 373 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 CYP2C59P-201ENST00000457790 269 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC117503.1-201ENST00000472241 394 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 RNU6-416P-201ENST00000516265 103 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AP001317.1-201ENST00000531194 960 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AL356432.3-201ENST00000568952 465 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC024619.4-201ENST00000580924 316 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 MIR4422-201ENST00000581938 83 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 VN1R88P-201ENST00000596787 292 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AC099842.1-201ENST00000619919 596 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 AL356266.1-201ENST00000623311 483 ntBASIC1.08□□□□□ -2.24
VPS25Q9BRG1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VPS25Q9BRG1 RNA5SP27-201ENST00000363839 119 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 SNORA25B-201ENST00000365507 128 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 SNORA51.6-201ENST00000384151 125 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 RNU6-40P-201ENST00000384254 107 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL079342.1-201ENST00000401460 267 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL121978.1-201ENST00000402778 359 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 MIR1283-2-201ENST00000408621 87 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 RN7SKP32-201ENST00000410167 303 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC007098.1-201ENST00000420122 367 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 NUP35P1-201ENST00000422734 947 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL160275.3-201ENST00000423876 471 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 UBE2V1P4-201ENST00000425374 344 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 ZYG11AP1-201ENST00000430329 837 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC107083.1-201ENST00000439643 279 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 RPS3P1-201ENST00000456781 192 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL049873.1-201ENST00000480540 376 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 RNU1-103P-201ENST00000516502 125 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 SNORD19.2-201ENST00000516978 73 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AP003066.2-201ENST00000529375 555 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 SNRPGP18-201ENST00000553000 214 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AP001485.1-201ENST00000604799 199 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC107905.1-201ENST00000616204 426 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC108479.2-201ENST00000617314 601 ntBASIC1.07□□□□□ -2.24
VPS25Q9BRG1 AC006020.1-201ENST00000420179 1854 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 RNA5SP289-201ENST00000362332 137 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 RNU6-819P-201ENST00000364116 107 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 U3.12-201ENST00000364498 214 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 MIR7-1-201ENST00000384871 110 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL109755.1-201ENST00000401791 649 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC007919.1-201ENST00000429380 217 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL121601.2-201ENST00000438019 707 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AP000949.1-201ENST00000438328 629 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL354941.1-201ENST00000438600 464 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 HMGB1P18-201ENST00000438801 619 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AC007677.1-201ENST00000445757 515 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL109933.2-201ENST00000452651 260 ntBASIC1.06□□□□□ -2.24
VPS25Q9BRG1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.06□□□□□ -2.24
VPS25Q9BRG1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms