Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC023141.11-201ENST00000508864 202 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 RNU6-351P-201ENST00000516097 100 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL12A1Q99715 AC079148.1-201ENST00000565944 819 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AL161912.3-201ENST00000605404 628 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 FAM157A-202ENST00000615155 405 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 HMGB1P24-202ENST00000615653 685 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
COL12A1Q99715 MIR524-201ENST00000385242 87 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AC119618.1-201ENST00000434191 222 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 RPS26P56-201ENST00000444468 240 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.72□□□□□ -2.29
COL12A1Q99715 AL390862.1-201ENST00000635467 1469 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 AL161722.3-201ENST00000605789 2983 ntBASIC0.72□□□□□ -2.29
COL12A1Q99715 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
COL12A1Q99715 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.71□□□□□ -2.3
COL12A1Q99715 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.71□□□□□ -2.3
COL12A1Q99715 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.71□□□□□ -2.3
COL12A1Q99715 AC068787.1-201ENST00000623908 691 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
COL12A1Q99715 ZNF33CP-201ENST00000432492 2030 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 RNU6-173P-201ENST00000364215 104 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 RNU6-1305P-201ENST00000364353 104 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 SNORA2A-201ENST00000383885 135 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 Y_RNA.610-201ENST00000410681 103 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.71□□□□□ -2.3
COL12A1Q99715 AL158823.1-201ENST00000418441 478 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.71□□□□□ -2.3
COL12A1Q99715 RPS29P28-201ENST00000446439 141 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 AC121161.1-201ENST00000510606 652 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.71□□□□□ -2.3
COL12A1Q99715 SNORA31.20-201ENST00000517111 133 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 BTF3P12-201ENST00000519620 469 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 MTCO1P47-201ENST00000523889 1271 ntBASIC0.71□□□□□ -2.3
COL12A1Q99715 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.71□□□□□ -2.3
COL12A1Q99715 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.71□□□□□ -2.3
COL12A1Q99715 RNU6-1263P-201ENST00000384601 106 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL12A1Q99715 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.7□□□□□ -2.3
COL12A1Q99715 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
COL12A1Q99715 SDCBPP1-201ENST00000440192 890 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 Y_RNA.644-201ENST00000459006 113 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 CASP1P1-201ENST00000526345 212 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AC090425.2-201ENST00000608818 501 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.7□□□□□ -2.3
COL12A1Q99715 Z82195.2-201ENST00000612348 18351 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.7□□□□□ -2.3
COL12A1Q99715 RFESDP1-201ENST00000422350 461 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 HMGB1P9-201ENST00000429856 646 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 USP12PX-201ENST00000432383 1057 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.7□□□□□ -2.3
COL12A1Q99715 RNA5SP285-201ENST00000516619 119 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 RNU6-711P-201ENST00000517255 106 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL12A1Q99715 MIR5194-201ENST00000582634 120 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.7□□□□□ -2.3
COL12A1Q99715 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL12A1Q99715 AL500527.1-201ENST00000448532 255 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AL121769.1-201ENST00000469473 401 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AC096745.1-201ENST00000509945 370 ntBASIC0.7□□□□□ -2.3
COL12A1Q99715 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.7□□□□□ -2.3
COL12A1Q99715 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL12A1Q99715 U8.3-201ENST00000363321 132 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 SNORA62.1-201ENST00000364287 154 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 MIR1207-201ENST00000408249 87 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 RNU4-72P-201ENST00000410754 173 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
COL12A1Q99715 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.69□□□□□ -2.3
COL12A1Q99715 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.69□□□□□ -2.3
COL12A1Q99715 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.69□□□□□ -2.3
COL12A1Q99715 AP001486.3-201ENST00000615334 372 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 AC010889.1-201ENST00000566193 2666 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
COL12A1Q99715 RNU6-942P-201ENST00000363002 107 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 RPL23AP32-201ENST00000395315 459 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 RNA5SP511-201ENST00000410487 115 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 UBE2V1P9-201ENST00000414760 368 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.69□□□□□ -2.3
COL12A1Q99715 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.69□□□□□ -2.3
COL12A1Q99715 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.69□□□□□ -2.3
COL12A1Q99715 UBE2L4-201ENST00000587688 464 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 AL157700.1-201ENST00000561973 1432 ntBASIC0.69□□□□□ -2.3
COL12A1Q99715 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
COL12A1Q99715 RNU1-23P-201ENST00000363361 144 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 SNORA23-201ENST00000365128 182 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 SNORD23.1-201ENST00000408212 104 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 RNU2-70P-201ENST00000410718 179 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 MTND2P2-201ENST00000434633 945 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 LSM1P1-201ENST00000438629 273 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms