Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
NEK1Q96PY6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEK1Q96PY6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEK1Q96PY6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NEK1Q96PY6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 SNORD116-1-201ENST00000384335 95 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AL139095.1-201ENST00000404326 391 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 RNA5SP38-201ENST00000410750 119 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AL139281.1-201ENST00000422120 335 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 RPL23AP58-201ENST00000440453 469 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 COX6CP2-201ENST00000444980 225 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 RPL23AP41-201ENST00000484754 458 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC012414.6-201ENST00000568241 401 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AL356432.3-201ENST00000568952 465 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC078899.3-201ENST00000599065 212 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC024153.1-201ENST00000603103 365 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.34□□□□□ -1.87
NEK1Q96PY6 AC009159.1-201ENST00000618386 642 ntBASIC3.34□□□□□ -1.87
NEK1Q96PY6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.88
NEK1Q96PY6 AL138713.1-201ENST00000624026 2130 ntBASIC3.34□□□□□ -1.88
NEK1Q96PY6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NEK1Q96PY6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEK1Q96PY6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEK1Q96PY6 OR5J1P-201ENST00000313544 939 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 SNORA23-201ENST00000365128 182 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 RNU6-278P-201ENST00000390945 109 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 RPS4XP3-201ENST00000398541 413 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 FCF1P10-201ENST00000407590 479 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 RN7SKP123-201ENST00000410732 291 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 USP9YP13-201ENST00000417797 480 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL356867.1-201ENST00000429623 299 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL049734.2-201ENST00000441066 616 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AP000936.2-201ENST00000447151 681 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC003982.1-202ENST00000469928 248 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 HSPE1P6-201ENST00000479457 291 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL049874.1-201ENST00000489560 388 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC091826.1-201ENST00000514065 313 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 RNU6-201P-201ENST00000517100 61 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC022616.6-201ENST00000520479 119 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 GTF3AP2-201ENST00000557014 266 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL133153.1-201ENST00000557756 303 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 PIGPP4-201ENST00000584447 307 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC121334.2-201ENST00000605387 271 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL391813.2-201ENST00000609113 322 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC090970.3-201ENST00000612566 866 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AC093838.1-201ENST00000613014 469 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 TUG1_2.1-201ENST00000614234 87 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL158063.1-201ENST00000615349 536 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL138880.2-201ENST00000616214 239 ntBASIC3.33□□□□□ -1.88
NEK1Q96PY6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NEK1Q96PY6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.33□□□□□ -1.88
NEK1Q96PY6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEK1Q96PY6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEK1Q96PY6 RNU6-223P-201ENST00000362830 107 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 Y_RNA.598-201ENST00000410480 95 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 Y_RNA.608-201ENST00000410647 95 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 RN7SKP142-201ENST00000411236 328 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL353777.1-201ENST00000425552 326 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC008850.1-201ENST00000427546 362 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 SAR1AP4-201ENST00000429225 591 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL590664.1-201ENST00000448065 339 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 MTND2P24-201ENST00000453434 806 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL590639.1-201ENST00000456484 337 ntBASIC3.32□□□□□ -1.88
NEK1Q96PY6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms