Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL355598.1-201ENST00000604169 202 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AL158032.1-201ENST00000605401 106 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 MIR6716-201ENST00000613413 80 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 OR52H1-202ENST00000641796 1061 ntBASIC3.12□□□□□ -1.91
CMTM3Q96MX0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
CMTM3Q96MX0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 SNORA62-201ENST00000365493 153 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RNU6-1103P-201ENST00000384150 107 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 MIR1-2-201ENST00000384961 85 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 GSTA9P-201ENST00000406231 611 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RNU2-66P-201ENST00000410650 161 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RNU6-387P-201ENST00000411331 105 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RPL26P27-201ENST00000414397 437 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 HMGB1P9-201ENST00000429856 646 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 DPPA3P1-201ENST00000448050 469 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RPL23AP67-201ENST00000465341 474 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RPL36AP51-201ENST00000487216 318 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 RNA5SP385-201ENST00000515947 110 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 MRPL49P2-201ENST00000521066 465 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AP003730.1-201ENST00000524605 285 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC009063.1-201ENST00000563342 702 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC010653.1-201ENST00000571108 881 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AC006077.1-201ENST00000604746 343 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 MLECP1-201ENST00000615893 709 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 AL357559.1-201ENST00000622228 274 ntBASIC3.11□□□□□ -1.91
CMTM3Q96MX0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CMTM3Q96MX0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 Y_RNA.296-201ENST00000364930 108 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MIR454-201ENST00000390180 115 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC010975.2-201ENST00000427781 588 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 C4BPAP2-201ENST00000428434 478 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 DLGAP5P1-201ENST00000430307 464 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MTATP6P7-201ENST00000453315 681 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RPS27AP10-201ENST00000496103 208 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC026801.1-201ENST00000497178 464 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RNU6-123P-201ENST00000516163 102 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MIR2116-201ENST00000517221 80 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 OR4R1P-201ENST00000529879 463 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 SUB1P2-201ENST00000556401 297 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC010546.1-201ENST00000569391 485 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MIR1273C-201ENST00000578669 77 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC008521.1-201ENST00000587471 187 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 RNU4-89P-201ENST00000607443 133 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MIR6748-201ENST00000610433 71 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AL157786.1-207ENST00000627771 695 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.1□□□□□ -1.91
CMTM3Q96MX0 MTND4P35-201ENST00000604257 1375 ntBASIC3.1□□□□□ -1.91
CMTM3Q96MX0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms