Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RNU6-278P-201ENST00000390945 109 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 MIR888-201ENST00000401186 77 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AL139039.1-201ENST00000401900 692 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AL359634.1-202ENST00000404721 284 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC108938.1-201ENST00000451204 136 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 SNORA59A-201ENST00000459326 152 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RPL23AP11-201ENST00000475260 469 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AIG1P1-201ENST00000503376 148 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC114786.4-201ENST00000508771 728 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC114797.1-201ENST00000514003 728 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RNA5SP282-201ENST00000516355 108 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RN7SKP265-201ENST00000516448 223 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 RN7SKP258-201ENST00000517151 304 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 SUB1P1-201ENST00000524415 382 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AP000907.2-201ENST00000530827 353 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 ISCA1P3-201ENST00000577104 373 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 MIR4672-201ENST00000583126 81 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AP000811.1-201ENST00000603803 651 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC018714.1-201ENST00000605028 208 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 CR381653.2-201ENST00000624041 768 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 AC007490.1-201ENST00000624321 703 ntBASIC2.84□□□□□ -1.95
ZNF560Q96MR9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF560Q96MR9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
ZNF560Q96MR9 MTND4P16-201ENST00000466108 1367 ntBASIC2.84□□□□□ -1.96
ZNF560Q96MR9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
ZNF560Q96MR9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 CR848007.1-201ENST00000442354 1699 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 RNU6-1214P-201ENST00000363650 109 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 MIR767-201ENST00000390228 109 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC119751.3-201ENST00000399720 670 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 RPS4XP8-201ENST00000402039 771 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 HMGN2P35-201ENST00000412164 270 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 RPL23AP39-201ENST00000415533 405 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 VPS26BP1-201ENST00000417155 755 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 MRPS17P3-201ENST00000465453 385 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 RNU6-64P-201ENST00000517119 105 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 DEFB108A-201ENST00000530110 222 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AP001004.1-201ENST00000582468 324 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC005498.1-201ENST00000592125 465 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC234772.3-201ENST00000602277 528 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AL355472.4-201ENST00000610233 626 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 ASNSP3-201ENST00000451989 1306 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 AL136360.1-201ENST00000503377 1900 ntBASIC2.83□□□□□ -1.96
ZNF560Q96MR9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF560Q96MR9 SNORD62.1-201ENST00000362541 86 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RNU6-1284P-201ENST00000363701 100 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RNU5A-8P-201ENST00000364102 114 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC078974.1-201ENST00000411597 223 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC098592.1-201ENST00000419352 333 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RPL7P37-201ENST00000425095 738 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 MTATP6P30-201ENST00000443540 664 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RPL12P25-201ENST00000455592 494 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC108059.3-201ENST00000456388 214 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms