Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC084198.1-201ENST00000477747 402 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 ARL4AP2-201ENST00000507378 601 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC098591.2-201ENST00000510152 315 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNU6-685P-201ENST00000517088 95 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNA5SP165-201ENST00000517142 115 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 RNU6-711P-201ENST00000517255 106 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC104383.1-201ENST00000530297 370 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 CYCSP30-201ENST00000546447 172 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC106785.1-201ENST00000565935 262 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 TPRKBP2-201ENST00000565969 475 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AL670379.4-201ENST00000605279 254 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AP001596.2-201ENST00000608410 312 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC092954.2-201ENST00000609103 430 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 AC073308.1-201ENST00000623696 305 ntBASIC3.73□□□□□ -1.81
CCDC138Q96M89 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC138Q96M89 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC138Q96M89 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC138Q96M89 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC138Q96M89 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 RNU6-1029P-201ENST00000384109 107 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 RNU6-1158P-201ENST00000391167 107 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 CISD1P1-201ENST00000393907 327 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL590002.1-201ENST00000406554 418 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 HMGB3P20-201ENST00000417997 600 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC099548.1-201ENST00000421443 426 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC138Q96M89 MTCYBP5-201ENST00000423752 1135 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 NEK4P1-201ENST00000433383 879 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL596276.1-201ENST00000434465 418 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC010099.1-201ENST00000455434 375 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 RPL21P129-201ENST00000491732 478 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 AP000867.2-201ENST00000532468 320 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL512310.1-201ENST00000548639 172 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL512360.1-201ENST00000555346 234 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL121576.1-201ENST00000556055 276 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 AL137849.1-201ENST00000604767 169 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 FP236240.3-201ENST00000623061 327 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 AC099506.2-201ENST00000623074 221 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
CCDC138Q96M89 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC138Q96M89 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC138Q96M89 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 SNORA4.3-201ENST00000365564 137 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 MIR184-201ENST00000384962 84 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 SNORA57.1-201ENST00000391227 145 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 AL591416.1-201ENST00000404015 867 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 FCF1P9-201ENST00000412546 282 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 MTCO3P30-201ENST00000426425 670 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AL606489.2-201ENST00000433886 234 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 RPL7P54-201ENST00000438336 674 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 HIGD1AP11-201ENST00000438361 280 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AL162395.1-201ENST00000457882 422 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 GMFBP1-201ENST00000467831 427 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 RN7SL132P-201ENST00000478131 296 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 TRBV12-2-201ENST00000489763 344 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 RN7SL323P-201ENST00000494712 295 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 Y_RNA.693-201ENST00000516641 110 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC138Q96M89 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC027807.1-201ENST00000559921 996 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC136619.2-201ENST00000563361 631 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 HMGB1P33-201ENST00000563485 527 ntBASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC138Q96M89 AC008752.3-201ENST00000588113 712 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms