Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VMP1Q96GC9 MTND4P27-201ENST00000450813 1354 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 RNA5SP374-201ENST00000362939 125 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 RNU6-658P-201ENST00000384606 106 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 RNU2-62P-201ENST00000410868 191 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 SEPT2P1-201ENST00000419651 180 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 Z73417.1-201ENST00000447373 778 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 HMGN2P10-201ENST00000448085 265 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC009961.3-201ENST00000449832 765 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 OR6C5P-201ENST00000452388 923 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 GSTA11P-201ENST00000452866 669 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC233279.1-201ENST00000455300 423 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC006445.1-201ENST00000491925 405 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 SNORA74D-201ENST00000516404 141 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 RNU6-703P-201ENST00000516946 107 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VMP1Q96GC9 RPS3AP4-201ENST00000555161 764 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 MIR3146-201ENST00000580367 79 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 PRELID3BP8-201ENST00000604148 295 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC025588.2-201ENST00000604851 466 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.93□□□□□ -1.94
VMP1Q96GC9 AC011939.3-201ENST00000613686 466 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 MIR622-201ENST00000638396 96 ntBASIC2.93□□□□□ -1.94
VMP1Q96GC9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VMP1Q96GC9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VMP1Q96GC9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AL391994.1-201ENST00000254724 282 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VMP1Q96GC9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VMP1Q96GC9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 SNORD15B-201ENST00000384714 146 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 RNU6-443P-201ENST00000384780 107 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 NEFMP1-201ENST00000443423 1006 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AL671855.1-201ENST00000446875 1203 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AP000852.1-201ENST00000472460 573 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 RBM43P1-201ENST00000476891 1081 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC090096.1-201ENST00000489168 390 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 GZMAP1-201ENST00000503054 631 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 RNU6-143P-201ENST00000516942 93 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 SNORD19.2-201ENST00000516978 73 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 RNU6-1003P-201ENST00000517099 105 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 BTF3P12-201ENST00000519620 469 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC023824.2-201ENST00000566185 400 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 MTCO3P13-201ENST00000577757 781 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 MIR5194-201ENST00000582634 120 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC005261.5-201ENST00000596280 355 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC024933.1-201ENST00000608472 348 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC107871.2-201ENST00000612894 502 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
VMP1Q96GC9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 AC093536.2-201ENST00000565257 1406 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.92□□□□□ -1.94
VMP1Q96GC9 Z82209.1-201ENST00000422141 2135 ntBASIC2.92□□□□□ -1.94
VMP1Q96GC9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 NACAP2-201ENST00000318548 624 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 RNY3P13-201ENST00000365542 102 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 MIR181B1-201ENST00000385240 110 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 U8.14-201ENST00000390843 143 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 RPS24P7-201ENST00000416921 246 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 RAC1P6-201ENST00000423911 575 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 MTCO3P30-201ENST00000426425 670 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 MTND4P25-201ENST00000441039 533 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC072039.1-201ENST00000477611 581 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC139453.3-201ENST00000493276 369 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC116347.2-201ENST00000514912 523 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 SNORA31.15-201ENST00000516771 132 ntBASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.91□□□□□ -1.94
VMP1Q96GC9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms