Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC105252.1-201ENST00000503089 286 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 Y_RNA.672-201ENST00000516289 104 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 RNU6-677P-201ENST00000516914 101 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 AL365204.3-201ENST00000612448 685 ntBASIC3.43□□□□□ -1.86
SKA1Q96BD8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.43□□□□□ -1.86
SKA1Q96BD8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SKA1Q96BD8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SKA1Q96BD8 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 RNU6-288P-201ENST00000363690 104 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 RNU6-960P-201ENST00000364056 120 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 RPS12P24-201ENST00000412619 387 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AL513477.1-202ENST00000417061 214 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 DBIP2-201ENST00000419076 262 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AL589872.1-201ENST00000426602 288 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 RPS24P13-201ENST00000442520 397 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC026801.1-201ENST00000497178 464 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC118465.1-201ENST00000513820 1271 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 RNU1-103P-201ENST00000516502 125 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC010546.1-201ENST00000569391 485 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 MIR548AB-201ENST00000584917 84 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC174048.1-201ENST00000603389 144 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC013562.2-201ENST00000611632 603 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 MIR8057-201ENST00000620957 69 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 AC025048.6-202ENST00000627667 438 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 U2.21-201ENST00000637295 81 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.42□□□□□ -1.86
SKA1Q96BD8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.42□□□□□ -1.86
SKA1Q96BD8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SKA1Q96BD8 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 SNORD56.2-201ENST00000363242 71 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 RNU6-778P-201ENST00000363269 103 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 SMIM11P1-201ENST00000369586 178 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 BPY2DP-201ENST00000422208 265 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 RPL7P37-201ENST00000425095 738 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC005300.1-201ENST00000428401 373 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC009969.1-201ENST00000438726 172 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 USP9YP15-201ENST00000442391 422 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 TAF9P1-201ENST00000445421 515 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 Z96811.1-201ENST00000445880 108 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 TAF9P2-201ENST00000454958 515 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 RPS26P21-201ENST00000475397 348 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 RPS27AP10-201ENST00000496103 208 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 MTND3P12-201ENST00000559068 328 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 MIR5680-201ENST00000577577 84 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 MIR4276-201ENST00000584832 70 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC011471.1-201ENST00000585766 187 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC009977.1-201ENST00000586015 570 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 HMGN1P30-201ENST00000589286 268 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 YPEL5P2-201ENST00000605553 359 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC011939.3-201ENST00000613686 466 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC078883.4-201ENST00000623218 367 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 SCARNA15.3-201ENST00000626315 122 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 SCARNA4.1-201ENST00000628597 123 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 MTND5P42-201ENST00000637720 498 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 AC099654.13-201ENST00000639774 207 ntBASIC3.41□□□□□ -1.86
SKA1Q96BD8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.41□□□□□ -1.86
SKA1Q96BD8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SKA1Q96BD8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SKA1Q96BD8 ELF2P3-201ENST00000445099 1506 ntBASIC3.4□□□□□ -1.86
SKA1Q96BD8 GNG5P1-201ENST00000255500 204 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC073343.1-201ENST00000328239 651 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 RNY1P12-201ENST00000364251 105 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 ELOCP4-201ENST00000420090 333 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 CYCSP46-201ENST00000423569 204 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 SKA2P1-201ENST00000425592 390 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms