Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 MIR22-201ENST00000362190 85 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 Y_RNA.409-201ENST00000383990 98 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 RNU6-432P-201ENST00000384196 109 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 SNORD67-201ENST00000390833 111 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC005094.1-201ENST00000440420 368 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC079781.2-201ENST00000446424 169 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 MRPS31P2-201ENST00000451581 518 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC234775.1-201ENST00000454247 670 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC021205.2-201ENST00000480069 347 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC116353.2-201ENST00000505332 712 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC105914.1-201ENST00000511798 226 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC109635.3-201ENST00000529536 185 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AL353748.2-201ENST00000622148 471 ntBASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RAPGEF4Q8WZA2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RNU6-1120P-201ENST00000362988 108 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RNU6-456P-201ENST00000384493 107 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL109755.1-201ENST00000401791 649 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RNU4-65P-201ENST00000410473 140 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL139132.1-201ENST00000431587 344 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 MTND4P18-201ENST00000447010 465 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RPL21P8-201ENST00000465083 535 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL049714.1-201ENST00000466686 347 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 RPS4XP22-201ENST00000480755 780 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AC068305.1-201ENST00000497406 726 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 HMGN1P28-201ENST00000521340 364 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AC104383.1-201ENST00000530297 370 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL512360.1-201ENST00000555346 234 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AC025678.1-201ENST00000567861 338 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 MIR4293-201ENST00000584305 78 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 GLUD1P4-201ENST00000590914 418 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AL034351.1-201ENST00000605288 668 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AC019226.1-201ENST00000625666 515 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
RAPGEF4Q8WZA2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 HSPE1P11-201ENST00000339579 310 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 Y_RNA.88-201ENST00000363029 99 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 Y_RNA.453-201ENST00000384223 109 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AL662791.1-201ENST00000441992 928 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC022364.2-201ENST00000457963 554 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 RPL31P58-201ENST00000469001 379 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 RPS29P26-201ENST00000477483 171 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 VN1R104P-201ENST00000505115 1009 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 RNU6-410P-201ENST00000517006 107 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 RNU6-64P-201ENST00000517119 105 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC100870.1-201ENST00000522035 505 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 TGIF1P1-201ENST00000558095 802 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC068135.2-201ENST00000569293 1028 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 XIAPP1-201ENST00000603162 600 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.07□□□□□ -1.76
RAPGEF4Q8WZA2 AP002360.4-201ENST00000606980 481 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms