| ARAP3 | Q8WWN8 | RNU2-15P-201 | ENST00000410692 | 191 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | ACBD3-AS1-201 | ENST00000440540 | 535 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | GXYLT1P1-201 | ENST00000446657 | 490 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | RPL32P14-201 | ENST00000463196 | 378 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | OR52A4P-202 | ENST00000481634 | 799 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AL359273.1-203 | ENST00000506295 | 602 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC112518.2-201 | ENST00000508565 | 425 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC025768.1-201 | ENST00000510057 | 267 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AL359273.1-201 | ENST00000510918 | 627 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC104233.2-201 | ENST00000518922 | 414 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC021979.1-201 | ENST00000553822 | 336 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AL136298.1-201 | ENST00000557371 | 566 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC007953.2-201 | ENST00000603299 | 193 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AP002906.1-201 | ENST00000603405 | 233 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | CEP57L1-203 | ENST00000368970 | 1680 nt | APPRIS ALT2 TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | Y_RNA.374-201 | ENST00000365606 | 101 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | RPS4XP3-201 | ENST00000398541 | 413 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AL512661.1-201 | ENST00000434586 | 1253 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | CALM1P1-201 | ENST00000442082 | 433 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC026347.1-201 | ENST00000463255 | 474 nt | TSL 3 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | XACT-201 | ENST00000468762 | 497 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC093281.2-201 | ENST00000510153 | 597 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC006518.2-201 | ENST00000542513 | 940 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC090502.2-201 | ENST00000549267 | 280 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC002487.1-201 | ENST00000604565 | 994 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AP003973.1-201 | ENST00000604639 | 691 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | NEAT1-205 | ENST00000616315 | 483 nt | TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | MIR6788-201 | ENST00000618842 | 66 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | AC007275.1-201 | ENST00000621243 | 671 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| ARAP3 | Q8WWN8 | ZNF849P-201 | ENST00000594711 | 1566 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MLIP-AS1-201 | ENST00000434196 | 1534 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL158064.1-201 | ENST00000627044 | 2242 nt | TSL 4 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU6-1066P-201 | ENST00000363573 | 105 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | SNORD116-23-201 | ENST00000384645 | 92 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU2-47P-201 | ENST00000410649 | 186 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL365184.1-201 | ENST00000413801 | 572 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | FCF1P2-201 | ENST00000415284 | 583 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | SFR1P2-201 | ENST00000421841 | 730 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL138775.1-201 | ENST00000429539 | 575 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC017048.2-201 | ENST00000431455 | 822 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MTND2P29-201 | ENST00000438595 | 412 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | TMEM247-203 | ENST00000449601 | 741 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MGAT4A-209 | ENST00000495056 | 683 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MTND3P24-201 | ENST00000506306 | 329 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC010625.1-201 | ENST00000511296 | 403 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AF131216.2-201 | ENST00000512316 | 564 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC243585.2-201 | ENST00000619099 | 508 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC091895.1-201 | ENST00000624494 | 256 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | PABPC1P9-201 | ENST00000426076 | 1612 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | CHORDC1-206 | ENST00000529987 | 1698 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU5D-1-201 | ENST00000363299 | 116 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU6-792P-201 | ENST00000363490 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU6-932P-201 | ENST00000391108 | 106 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MYO16-AS2-201 | ENST00000412809 | 436 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | OFD1P2Y-201 | ENST00000421895 | 1149 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC018643.1-201 | ENST00000445459 | 414 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL050341.1-201 | ENST00000447743 | 313 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MTCO2P9-201 | ENST00000503214 | 694 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC113347.4-201 | ENST00000506032 | 685 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AP005435.4-201 | ENST00000529514 | 284 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | TSPAN19-204 | ENST00000532498 | 998 nt | APPRIS P1 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL035078.2-201 | ENST00000533832 | 326 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC011509.1-201 | ENST00000589512 | 164 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC026741.1-201 | ENST00000605892 | 482 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL354696.1-201 | ENST00000614652 | 497 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC008083.4-201 | ENST00000615076 | 444 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL161629.2-201 | ENST00000615347 | 275 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | U3.29-201 | ENST00000391296 | 212 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL133264.1-201 | ENST00000407157 | 562 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC010967.2-201 | ENST00000418451 | 333 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | UBE2V1P6-201 | ENST00000430840 | 422 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC009158.1-207 | ENST00000432973 | 394 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC072062.1-204 | ENST00000437897 | 1132 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | LINC00446-202 | ENST00000438327 | 357 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | RNU7-140P-201 | ENST00000459546 | 60 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC090515.1-201 | ENST00000465295 | 476 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | TOPORSLP1-202 | ENST00000469756 | 969 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC013828.1-201 | ENST00000481845 | 158 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | KLRA1P-201 | ENST00000503499 | 986 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC097521.1-201 | ENST00000505488 | 567 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | LINC02103-201 | ENST00000512849 | 523 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC087272.1-201 | ENST00000523624 | 533 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AP003730.2-201 | ENST00000526385 | 546 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | MIR4789-201 | ENST00000577469 | 82 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC090227.2-201 | ENST00000591105 | 340 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC068944.2-201 | ENST00000610373 | 403 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AC097460.3-201 | ENST00000623099 | 442 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | AL163152.1-201 | ENST00000642001 | 374 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | CCDC14-221 | ENST00000489746 | 6476 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.19 | □□□□□ -2.06 | | |
| ARAP3 | Q8WWN8 | SNHG14-215 | ENST00000551631 | 4008 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |