Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SNRPGP16-201ENST00000533275 226 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC090502.2-201ENST00000549267 280 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 DUXAP1-201ENST00000556632 463 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AMZ2P1-203ENST00000565833 850 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 RNU6-88P-201ENST00000606801 100 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 AC079395.3-201ENST00000615161 484 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 AP000484.1-201ENST00000620067 1252 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2□□□□□ -2.09
SHROOM3Q8TF72 SLC10A5P1-201ENST00000379063 1306 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 ZNF734P-201ENST00000419494 1534 ntBASIC2□□□□□ -2.09
SHROOM3Q8TF72 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM3Q8TF72 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM3Q8TF72 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU6-441P-201ENST00000384545 106 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU6-636P-201ENST00000384598 107 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPS3AP9-201ENST00000417027 792 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC099677.1-201ENST00000420575 175 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC009237.2-201ENST00000421358 284 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL590664.1-201ENST00000448065 339 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 SNORD11.1-201ENST00000459482 85 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC140059.1-201ENST00000489238 361 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC006499.2-201ENST00000513470 337 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1261P-201ENST00000517194 104 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 LSM6P2-201ENST00000552208 177 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL139344.1-201ENST00000605228 195 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC109809.1-201ENST00000619665 545 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 MTND5P3-201ENST00000438536 1800 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 WWP1P1-201ENST00000466609 2769 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 CDR1-202ENST00000625883 1485 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC010680.1-201ENST00000590024 3590 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1214P-201ENST00000363650 109 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU4-68P-201ENST00000364314 141 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 Y_RNA.302-201ENST00000364997 102 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPL21P75-201ENST00000396599 483 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPL21P1-201ENST00000399532 476 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPL21P28-201ENST00000401418 483 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL592114.1-201ENST00000403842 483 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC092447.6-201ENST00000414578 210 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC084290.1-201ENST00000434995 374 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 EEF1E1P1-201ENST00000446998 430 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AL109741.2-201ENST00000455561 343 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPL21P103-201ENST00000479921 488 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC007182.2-201ENST00000489251 402 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RPL21P16-201ENST00000495531 483 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 MTCO2P15-201ENST00000532655 656 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 NBEAP1-201ENST00000554452 979 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AC245297.2-201ENST00000610119 565 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 AP000676.4-201ENST00000624659 623 ntBASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM3Q8TF72 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RNU6-1249P-201ENST00000363237 111 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RNU2-15P-201ENST00000410692 191 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPL19P1-201ENST00000411635 428 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPL7P30-201ENST00000420888 709 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 MTND1P26-201ENST00000440488 538 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RNU7-136P-201ENST00000458819 69 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 snoU13.3-201ENST00000459441 104 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC090453.1-201ENST00000495560 436 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RPL38P4-201ENST00000502376 214 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC010587.2-201ENST00000511727 448 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RNA5SP216-201ENST00000516111 123 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 RNU6-56P-201ENST00000516986 93 ntBASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.98□□□□□ -2.09
SHROOM3Q8TF72 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms