Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TRAF3IP1Q8TDR0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
TRAF3IP1Q8TDR0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU6-1167P-201ENST00000363227 94 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 SNORD46.1-201ENST00000364139 104 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 RNY3P13-201ENST00000365542 102 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AL139397.2-201ENST00000404529 772 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 FCF1P1-201ENST00000432690 571 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC093156.1-201ENST00000440382 670 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 DDX3P2-201ENST00000446138 111 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 EPS15P1-201ENST00000448836 336 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AL590365.1-201ENST00000450788 243 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 NIPA2P5-201ENST00000452282 464 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 MTND1P12-201ENST00000455231 147 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 MTCO2P6-201ENST00000463134 685 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AIG1P1-201ENST00000503376 148 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 RNA5SP341-201ENST00000516261 117 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 RNA5SP290-201ENST00000517133 127 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC107934.1-201ENST00000522215 217 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 HPRT1P3-201ENST00000539521 576 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 MIR3118-1-201ENST00000581787 76 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC007179.3-201ENST00000604976 235 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 BX664608.1-201ENST00000610519 487 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC096577.2-201ENST00000611455 153 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
TRAF3IP1Q8TDR0 AL359693.1-201ENST00000614959 2407 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC092447.7-201ENST00000422212 1621 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU6-511P-201ENST00000363496 107 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 Y_RNA.245-201ENST00000364493 95 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 Y_RNA.560-201ENST00000384689 102 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC006366.1-201ENST00000422002 759 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 RPL37P4-201ENST00000448908 268 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 SNORD97-201ENST00000459187 142 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC098862.1-201ENST00000504991 413 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU6-759P-201ENST00000516740 103 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AP006587.4-201ENST00000526053 529 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC128657.1-201ENST00000549459 145 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 DPPA3P3-201ENST00000603842 430 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC105129.3-201ENST00000605455 485 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 MIR8057-201ENST00000620957 69 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC009878.1-201ENST00000621819 340 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AF246928.1-201ENST00000623768 87 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 AC091953.2-201ENST00000623979 160 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 MIR3651-201ENST00000630427 90 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 MTND5P29-201ENST00000458676 1807 ntBASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRAF3IP1Q8TDR0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU1-105P-201ENST00000363470 161 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 RNU5E-5P-201ENST00000365379 116 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 MTCYBP36-201ENST00000404146 440 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 NDUFS5P1-201ENST00000405668 289 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AL451062.2-201ENST00000427515 271 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 MED14P1-201ENST00000430517 648 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 MTND1P28-201ENST00000435623 950 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 MTND1P30-201ENST00000441241 901 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 KATNBL1P6-201ENST00000453433 915 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 RBM43P1-201ENST00000476891 1081 ntBASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.94□□□□□ -1.94
TRAF3IP1Q8TDR0 AC114797.1-201ENST00000514003 728 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms