Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLRN3Q8NCR9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
CLRN3Q8NCR9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.81
CLRN3Q8NCR9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 KPNA2P1-201ENST00000458289 1591 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 SNORA63-201ENST00000363450 132 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU6-270P-201ENST00000364131 105 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU6-1227P-201ENST00000383981 107 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU6-43P-201ENST00000384302 107 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU6-933P-201ENST00000384424 107 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL030996.1-201ENST00000411430 235 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL354751.2-201ENST00000415471 210 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC005534.2-201ENST00000431047 433 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 DAP3P1-201ENST00000441522 278 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL162151.2-201ENST00000448875 158 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RNU7-187P-201ENST00000458985 68 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 RPS3AP41-201ENST00000462701 778 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AP004607.1-201ENST00000524456 203 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC093249.1-201ENST00000567049 203 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC012616.1-201ENST00000600294 197 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL627309.6-201ENST00000606857 840 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL138721.1-201ENST00000616756 179 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC006111.3-201ENST00000622137 383 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC244517.12-201ENST00000623581 663 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AL669831.3-213ENST00000636676 183 ntBASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLRN3Q8NCR9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RNU1-150P-201ENST00000362491 162 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.146-201ENST00000363549 102 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RN7SKP113-201ENST00000363891 295 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 MIR517A-201ENST00000385001 87 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 MIR105-1-201ENST00000385222 81 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.579-201ENST00000390939 94 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RN7SKP263-201ENST00000411194 309 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC097713.2-201ENST00000430199 356 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 SSXP4-201ENST00000451349 245 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 PCMTD1P1-201ENST00000455560 355 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 SNORD5.1-201ENST00000458800 75 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC018437.1-201ENST00000492214 406 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RPS27AP10-201ENST00000496103 208 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC026782.1-201ENST00000512952 449 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RNA5SP446-201ENST00000515955 82 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RNU6-1153P-201ENST00000516760 105 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 IGKV3D-34-201ENST00000522638 302 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC080078.3-201ENST00000605407 463 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC022467.1-201ENST00000614738 749 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AL591926.8-201ENST00000616876 211 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AC099654.10-201ENST00000640395 161 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 MTND5P10-201ENST00000603719 1809 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 AL136164.3-201ENST00000624429 3978 ntBASIC3.76□□□□□ -1.81
CLRN3Q8NCR9 MTND4P23-201ENST00000447723 1363 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms