Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP38Q8NB14 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP38Q8NB14 AL445529.1-201ENST00000398713 389 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL591034.1-201ENST00000407447 340 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 RNU2-36P-201ENST00000410361 191 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL353678.1-201ENST00000422735 741 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 AL358934.1-201ENST00000432346 324 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.68□□□□□ -1.82
USP38Q8NB14 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.68□□□□□ -1.82
USP38Q8NB14 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 RPL23AP67-201ENST00000465341 474 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.68□□□□□ -1.82
USP38Q8NB14 CDC42P4-201ENST00000510507 563 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.68□□□□□ -1.82
USP38Q8NB14 Y_RNA.655-201ENST00000515919 96 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 RNU6-405P-201ENST00000516637 110 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.68□□□□□ -1.82
USP38Q8NB14 ARL2BPP2-201ENST00000550907 489 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.68□□□□□ -1.82
USP38Q8NB14 DPPA3P3-201ENST00000603842 430 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AC109347.2-201ENST00000610220 349 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL110115.1-201ENST00000614396 364 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AL356321.1-201ENST00000621360 228 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AC068880.5-201ENST00000624331 290 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP38Q8NB14 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USP38Q8NB14 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP38Q8NB14 AC110774.1-201ENST00000623567 2018 ntBASIC3.68□□□□□ -1.82
USP38Q8NB14 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP38Q8NB14 AC008568.2-201ENST00000623862 2313 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP38Q8NB14 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
USP38Q8NB14 RPL7P26-201ENST00000333817 754 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 SNORD56.2-201ENST00000363242 71 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 RNU4-1-201ENST00000363925 141 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 U3.11-201ENST00000364476 212 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AL359634.1-202ENST00000404721 284 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 U3.42-201ENST00000408746 214 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 UBE2D3P2-201ENST00000424409 445 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 RPL35AP12-201ENST00000425362 338 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AL356867.1-201ENST00000429623 299 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 FCF1P1-201ENST00000432690 571 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC016696.1-201ENST00000446949 318 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 SNRPGP6-201ENST00000451124 220 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 RBM43P1-201ENST00000476891 1081 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC109925.1-201ENST00000478069 331 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 RNU2-10P-201ENST00000516375 211 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 RNU6-430P-201ENST00000517078 107 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
USP38Q8NB14 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AL845331.3-202ENST00000562856 261 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 MIR4769-201ENST00000584126 77 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AC002545.1-201ENST00000592511 181 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC245014.2-201ENST00000603689 287 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC246785.4-201ENST00000605374 287 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.67□□□□□ -1.82
USP38Q8NB14 Z99129.1-201ENST00000612510 255 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.67□□□□□ -1.82
USP38Q8NB14 AL353746.1-201ENST00000566293 6881 ntBASIC3.67□□□□□ -1.82
USP38Q8NB14 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
USP38Q8NB14 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP38Q8NB14 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
USP38Q8NB14 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP38Q8NB14 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
USP38Q8NB14 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
USP38Q8NB14 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP38Q8NB14 SNORA54-201ENST00000384281 123 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 Y_RNA.517-201ENST00000384551 106 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 RNU2-16P-201ENST00000410712 136 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 BTF3L4P3-201ENST00000418879 476 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.66□□□□□ -1.82
USP38Q8NB14 RPL23AP82-202ENST00000427528 469 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC093106.2-201ENST00000428212 385 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AL590383.1-201ENST00000428602 75 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC092573.2-201ENST00000434546 243 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AL136380.1-201ENST00000447970 162 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 CENPBD1P1-201ENST00000464061 469 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 MTCO2P29-201ENST00000465212 189 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC138853.1-201ENST00000503549 823 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.66□□□□□ -1.82
USP38Q8NB14 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 RNU6-1220P-201ENST00000517126 108 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC093331.1-201ENST00000521474 169 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC022616.3-201ENST00000523940 148 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.66□□□□□ -1.82
USP38Q8NB14 HIGD1AP1-201ENST00000550979 275 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AC087883.1-201ENST00000551882 391 ntBASIC3.66□□□□□ -1.82
USP38Q8NB14 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms