Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC89Q8N998 AC012435.1-202ENST00000568772 240 ntBASIC3.2□□□□□ -1.9
CCDC89Q8N998 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
CCDC89Q8N998 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
CCDC89Q8N998 AC004223.4-201ENST00000612426 332 ntBASIC3.2□□□□□ -1.9
CCDC89Q8N998 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC89Q8N998 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC89Q8N998 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC89Q8N998 MTND4P35-201ENST00000604257 1375 ntBASIC3.2□□□□□ -1.9
CCDC89Q8N998 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC89Q8N998 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 SEPT2P1-201ENST00000419651 180 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC011233.1-201ENST00000422812 283 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AL592045.1-201ENST00000429867 352 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 HMGB3P12-201ENST00000438745 556 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AL590365.1-201ENST00000450788 243 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 MTND1P12-201ENST00000455231 147 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 MTND1P3-201ENST00000484956 952 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 GZMAP1-201ENST00000503054 631 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC112673.1-201ENST00000513168 575 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC006199.1-201ENST00000548728 219 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 AC174048.1-201ENST00000603389 144 ntBASIC3.19□□□□□ -1.9
CCDC89Q8N998 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC89Q8N998 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC89Q8N998 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC89Q8N998 MTND5P1-201ENST00000445440 1375 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 RNU5F-7P-201ENST00000363696 115 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 MIR301A-201ENST00000385261 86 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC89Q8N998 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 USP9YP6-201ENST00000413550 854 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 RPS15AP12-201ENST00000419498 388 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AL161651.1-201ENST00000440882 223 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 BRK1P2-201ENST00000442875 223 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 RNU6-1129P-201ENST00000515964 104 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 RNU6-677P-201ENST00000516914 101 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 MIR3167-201ENST00000579623 85 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC005261.5-201ENST00000596280 355 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC131159.1-201ENST00000621854 213 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 AC017037.3-201ENST00000625016 472 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 MTND5P42-201ENST00000637720 498 ntBASIC3.18□□□□□ -1.9
CCDC89Q8N998 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC89Q8N998 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 RNU6-960P-201ENST00000364056 120 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 RNU6-188P-201ENST00000364207 107 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 MTCYBP36-201ENST00000404146 440 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 FCF1P10-201ENST00000407590 479 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 Y_RNA.608-201ENST00000410647 95 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 RPL36AP6-201ENST00000435770 321 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 RN7SL863P-201ENST00000462370 296 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 RN7SL20P-201ENST00000488827 297 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 SAP18P1-201ENST00000512058 390 ntBASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC89Q8N998 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms