Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 MIR568-201ENST00000385036 95 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 MIR548F4-201ENST00000408515 105 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 TOMM20P4-201ENST00000427861 435 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 RPL21P91-201ENST00000429231 479 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC068287.1-201ENST00000430283 295 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 HMGN2P21-201ENST00000447764 270 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 FABP5P15-201ENST00000453566 214 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC006463.2-201ENST00000473326 348 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 NIP7P2-201ENST00000485801 544 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC004024.1-201ENST00000549244 247 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 AC004817.2-201ENST00000561794 651 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 7SK.7-201ENST00000603504 247 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 Z69720.2-201ENST00000624755 279 ntBASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ARHGEF39Q8N4T4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
ARHGEF39Q8N4T4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.39-201ENST00000362620 98 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNA5SP447-201ENST00000363749 119 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-596P-201ENST00000365395 98 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.389-201ENST00000383924 113 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 U3.22-201ENST00000391120 215 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNU2-23P-201ENST00000410545 195 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-325P-201ENST00000411132 105 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AL096701.2-201ENST00000416920 238 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AL356387.2-201ENST00000422272 243 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC009220.1-201ENST00000451614 275 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RNU6-1037P-201ENST00000459571 107 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RPL9P32-201ENST00000464118 620 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 HMGN1P11-201ENST00000508668 303 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC113155.1-201ENST00000511141 769 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 Y_RNA.721-201ENST00000517207 102 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC007991.1-201ENST00000522680 631 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AP002404.1-201ENST00000532005 451 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AL356218.2-201ENST00000605264 187 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC123912.5-201ENST00000605470 343 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 AC119674.1-207ENST00000641355 633 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.27□□□□□ -1.73
ARHGEF39Q8N4T4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms