Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL133271.1-201ENST00000538229 291 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL163153.1-201ENST00000554223 283 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MIR4298-201ENST00000584380 73 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC092807.2-201ENST00000609367 243 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 uc_338.15-201ENST00000615470 191 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC243312.2-201ENST00000623340 601 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL136313.1-201ENST00000624804 202 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MIR3651-201ENST00000630427 90 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MTND4LP32-201ENST00000636111 270 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1279P-201ENST00000383917 103 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-641P-201ENST00000384006 107 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 MIR559-201ENST00000385188 96 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNY4P36-201ENST00000391116 96 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 MIR548K-201ENST00000408406 116 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 HMGN1P24-201ENST00000412282 298 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC020550.1-201ENST00000447385 163 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 NDUFS5P3-201ENST00000450668 321 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.631-201ENST00000459607 101 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RPL32P34-201ENST00000486380 400 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 HMGB3P15-201ENST00000507326 574 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-559P-201ENST00000516151 98 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-798P-201ENST00000516912 103 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNA5SP503-201ENST00000517047 117 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-64P-201ENST00000517119 105 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 SETP7-201ENST00000552169 453 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 NCAPGP2-201ENST00000557911 754 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 APOOP1-201ENST00000604695 592 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC040896.1-201ENST00000613819 479 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 uc_338.34-201ENST00000617467 174 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 AL359757.2-201ENST00000624309 274 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 MTND5P42-201ENST00000637720 498 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
SLC44A3Q8N4M1 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.146-201ENST00000363549 102 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 SNORA33.2-201ENST00000365413 134 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.373-201ENST00000365600 103 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-339P-201ENST00000384310 107 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MIR490-201ENST00000384865 128 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MIR199A2-201ENST00000385289 110 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 OR6C66P-201ENST00000414917 930 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MTCO2P27-201ENST00000420740 428 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AL391219.1-201ENST00000422570 483 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RPL36AP6-201ENST00000435770 321 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC130509.1-201ENST00000464158 433 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RPS29P2-201ENST00000479278 136 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RPS26P15-201ENST00000488067 348 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC098591.2-201ENST00000510152 315 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1088P-201ENST00000516850 104 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 RN7SKP57-201ENST00000517248 293 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MIR4458-201ENST00000578872 75 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 MIR3671-201ENST00000580455 88 ntBASIC3.92□□□□□ -1.78
SLC44A3Q8N4M1 AC006504.6-201ENST00000590142 199 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms