Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AL031121.1-201ENST00000406553 254 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC092573.2-201ENST00000434546 243 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 HMGN2P20-201ENST00000437531 273 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 HMGB3P8-201ENST00000449709 577 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC087588.1-201ENST00000462203 316 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AL160314.1-201ENST00000490836 438 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 HMGB1P41-201ENST00000520234 440 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC022080.3-201ENST00000544433 482 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC013553.2-201ENST00000604244 589 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC116312.1-201ENST00000606841 314 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AP002360.4-201ENST00000606980 481 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 MIR7106-201ENST00000612419 65 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 Z99129.1-201ENST00000612510 255 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC073534.2-201ENST00000620377 381 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AL589994.2-201ENST00000621124 579 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC006111.3-201ENST00000622137 383 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 AC007785.2-201ENST00000598627 1916 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HERC6Q8IVU3 CR848007.1-201ENST00000442354 1699 ntBASIC3.65□□□□□ -1.83
HERC6Q8IVU3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC093908.1-201ENST00000623125 8092 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RNU6-283P-201ENST00000364788 107 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 Y_RNA.296-201ENST00000364930 108 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 MIR184-201ENST00000384962 84 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 MED13P1-201ENST00000428342 171 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 GPR143P-201ENST00000434155 205 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RPL36AP6-201ENST00000435770 321 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 NEFMP1-201ENST00000443423 1006 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC022364.2-201ENST00000457963 554 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RPL21P8-201ENST00000465083 535 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC109925.1-201ENST00000478069 331 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RPL30P14-201ENST00000482744 348 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC023194.1-201ENST00000493084 308 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC138853.1-201ENST00000503549 823 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 APOOP4-201ENST00000513530 597 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RNU6-410P-201ENST00000517006 107 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AL845331.3-202ENST00000562856 261 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AGGF1P4-201ENST00000568249 801 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 MIR4738-201ENST00000579134 87 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 GLUD1P4-201ENST00000590914 418 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC174048.1-201ENST00000603389 144 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC104763.2-201ENST00000604179 382 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC073657.2-201ENST00000605661 303 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC098614.4-201ENST00000607601 462 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC099842.1-201ENST00000619919 596 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 AC027309.3-201ENST00000623419 351 ntBASIC3.64□□□□□ -1.83
HERC6Q8IVU3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HERC6Q8IVU3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 RNA5SP197-201ENST00000363357 119 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 SNORA5B-201ENST00000363786 132 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 RNU6-169P-201ENST00000365336 107 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 RNU2-39P-201ENST00000410604 198 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC007919.1-201ENST00000429380 217 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 SETP5-201ENST00000437270 562 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.63□□□□□ -1.83
HERC6Q8IVU3 RNU6-420P-201ENST00000458780 107 ntBASIC3.63□□□□□ -1.83
HERC6Q8IVU3 AC117522.1-201ENST00000509821 380 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms