Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RNU6-827P-201ENST00000365553 106 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 Y_RNA.471-201ENST00000384312 102 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RNU6-700P-201ENST00000391043 107 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 COX5BP7-201ENST00000414780 274 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AL159987.2-201ENST00000432754 307 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AC016831.4-201ENST00000438302 307 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 FCF1P4-201ENST00000448326 183 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RN7SL481P-201ENST00000477764 299 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 HMGB1P35-201ENST00000503360 598 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AC008958.1-201ENST00000511047 682 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 RNU6-1023P-201ENST00000516137 106 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 IGKV2D-23-201ENST00000518179 286 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 MIR5699-201ENST00000578903 90 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 MIR5096-201ENST00000583713 70 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 MIR3936-201ENST00000584304 110 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 AL121932.1-201ENST00000605542 214 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.36□□□□□ -1.55
TRIM50Q86XT4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM50Q86XT4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 TLK1P1-201ENST00000456760 2440 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC007685.1-201ENST00000329806 452 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 RNU6-629P-201ENST00000384061 103 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 SNORA70F-201ENST00000384142 135 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 SNORA69.1-201ENST00000390904 137 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 RNU2-64P-201ENST00000411315 191 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AL592148.1-201ENST00000413568 445 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 C4BPAP2-201ENST00000428434 478 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC068287.1-201ENST00000430283 295 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC087650.1-201ENST00000431445 468 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 RPS17P8-201ENST00000434525 335 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 MTND4LP30-201ENST00000454092 297 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 U8.21-201ENST00000459536 136 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 RN7SL558P-201ENST00000497468 299 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 Y_RNA.673-201ENST00000516306 88 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC084851.1-201ENST00000529105 249 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC026470.2-201ENST00000561492 181 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 AL365440.1-201ENST00000436135 2167 ntBASIC5.35□□□□□ -1.55
TRIM50Q86XT4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM50Q86XT4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AL139811.1-201ENST00000424779 2299 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 MIR412-201ENST00000362142 91 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AL080315.1-201ENST00000406055 466 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 SNORD56-201ENST00000413522 71 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 snoU13.1-201ENST00000459157 104 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 ENPP7P9-201ENST00000514456 627 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AP003733.2-201ENST00000529409 171 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AC105129.1-201ENST00000560250 297 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AC233702.9-201ENST00000581528 203 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AC004852.3-201ENST00000614131 326 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 AL049555.1-201ENST00000562834 1933 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.34□□□□□ -1.55
TRIM50Q86XT4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM50Q86XT4 MTND5P9-201ENST00000503854 1755 ntBASIC5.34□□□□□ -1.56
TRIM50Q86XT4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM50Q86XT4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.34□□□□□ -1.56
TRIM50Q86XT4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
TRIM50Q86XT4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.34□□□□□ -1.56
TRIM50Q86XT4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.33□□□□□ -1.56
TRIM50Q86XT4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms