Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 ISCUP1-201ENST00000454451 448 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 RPS29P33-201ENST00000456717 146 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 RPL37P6-201ENST00000460682 294 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC007686.1-201ENST00000488511 463 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 RPL30P11-201ENST00000495304 339 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 SEPT14P8-201ENST00000508026 178 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC016065.2-201ENST00000514530 444 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 SNORD116-28-201ENST00000516123 91 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 RNU6-479P-201ENST00000516348 105 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 GSTP1P1-201ENST00000548078 319 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 MIR5699-201ENST00000578903 90 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC022726.1-201ENST00000587475 207 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AC008962.1-201ENST00000605729 304 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 MIR6820-201ENST00000611508 62 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 BX322639.1-202ENST00000423987 2213 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 AL445487.1-201ENST00000415694 1580 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 SALL4P2-201ENST00000423288 2910 ntBASIC4.35□□□□□ -1.71
ATG4DQ86TL0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG4DQ86TL0 DDX10P1-201ENST00000448545 1933 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 SNORD113-8-201ENST00000363497 74 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 SNORA22C-201ENST00000384614 134 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 MIR578-201ENST00000384828 96 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 MIR1271-201ENST00000408537 86 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 U3.39-201ENST00000408569 239 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU2-21P-201ENST00000410368 188 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU6-394P-201ENST00000410735 107 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AC092573.2-201ENST00000434546 243 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RPL23AP33-201ENST00000442301 452 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AC234775.1-201ENST00000454247 670 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AURKAPS2-201ENST00000454983 333 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AC087477.1-201ENST00000465747 340 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU6-313P-201ENST00000516317 112 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RNU6-62P-201ENST00000516526 102 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 RN7SL652P-201ENST00000577769 300 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 MIR15A-201ENST00000607334 83 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 SAMMSON-226ENST00000642089 1582 ntBASIC4.34□□□□□ -1.71
ATG4DQ86TL0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ATG4DQ86TL0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ATG4DQ86TL0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MTND5P9-201ENST00000503854 1755 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 RNU1-83P-201ENST00000363426 164 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 RNVU1-6-201ENST00000364688 164 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 RNA5SP87-201ENST00000384155 118 ntBASIC4.33□□□□□ -1.72
ATG4DQ86TL0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.33□□□□□ -1.72
ATG4DQ86TL0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms