Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
SHFQ7M4L6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHFQ7M4L6 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHFQ7M4L6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 AL354685.2-201ENST00000448218 1447 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AL139276.1-201ENST00000311910 1001 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 MIR372-201ENST00000362225 67 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 Y_RNA.88-201ENST00000363029 99 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 MIR30B-201ENST00000384850 88 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 U3.39-201ENST00000408569 239 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 OR9R1P-201ENST00000412200 877 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC092809.3-201ENST00000415453 231 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 SNRPEP10-201ENST00000420249 274 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 RPL21P133-201ENST00000443666 476 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 RPL31P60-201ENST00000478450 367 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC092185.1-201ENST00000491371 97 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AP001086.1-201ENST00000494882 321 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 RBBP4P6-201ENST00000508098 202 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC098591.2-201ENST00000510152 315 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 MTCO1P35-201ENST00000515270 228 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 SUB1P1-201ENST00000524415 382 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 HIGD1AP5-201ENST00000529959 259 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 OR5B10P-201ENST00000532869 642 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC004024.1-201ENST00000549244 247 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 HIF1AP1-201ENST00000553642 175 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 MIR4286-201ENST00000580651 93 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC008521.1-201ENST00000587471 187 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC104763.2-201ENST00000604179 382 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AL035413.2-201ENST00000604801 525 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC024614.3-201ENST00000637860 256 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC099654.14-201ENST00000638599 341 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHFQ7M4L6 AC116096.1-201ENST00000566804 2314 ntBASIC3.21□□□□□ -1.9
SHFQ7M4L6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHFQ7M4L6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHFQ7M4L6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.21□□□□□ -1.9
SHFQ7M4L6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHFQ7M4L6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHFQ7M4L6 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHFQ7M4L6 RPL32P3-201ENST00000359025 275 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-552P-201ENST00000362869 119 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-903P-201ENST00000391270 109 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC007390.1-201ENST00000415722 356 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RPL17P36-201ENST00000420302 549 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 BX679664.1-201ENST00000434429 253 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AL353572.1-201ENST00000442490 417 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 MTND1P18-201ENST00000448191 573 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RPS3AP46-201ENST00000448352 682 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 ELOCP23-201ENST00000452014 332 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 RPS4XP2-201ENST00000458402 793 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RPS4XP22-201ENST00000480755 780 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC104806.1-201ENST00000508720 308 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-123P-201ENST00000516163 102 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-927P-201ENST00000516199 100 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 RNU6-358P-201ENST00000516564 75 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC053481.4-201ENST00000583164 216 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC008945.2-201ENST00000606056 604 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 AC012409.4-201ENST00000612923 249 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 MIR6758-201ENST00000620653 63 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 DUXAP9-208ENST00000622815 614 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 U6.114-201ENST00000636407 96 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 MTND5P42-201ENST00000637720 498 ntBASIC3.2□□□□□ -1.9
SHFQ7M4L6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SHFQ7M4L6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms