Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC009643.2-201ENST00000603543 1448 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RN7SKP227-201ENST00000364445 330 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SNORA20.1-201ENST00000364790 130 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 MIR124-3-201ENST00000384866 87 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 MIR548I3-201ENST00000408378 149 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 MIR548I1-201ENST00000408810 149 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RN7SKP125-201ENST00000410481 302 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AL450023.3-201ENST00000440592 271 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RPS24P6-201ENST00000452670 400 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 CEACAMP4-201ENST00000457676 421 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC008958.1-201ENST00000511047 682 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RN7SKP46-201ENST00000515942 234 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RNU6-397P-201ENST00000516226 104 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RNA5SP34-201ENST00000516887 130 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RNA5SP290-201ENST00000517133 127 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC091144.1-201ENST00000519573 138 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC008121.1-201ENST00000603244 268 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 MIR6826-201ENST00000617808 98 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 AC107068.1-201ENST00000563286 4218 ntBASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.47□□□□□ -1.69
LRFN4Q6PJG9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.46□□□□□ -1.69
LRFN4Q6PJG9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
LRFN4Q6PJG9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LRFN4Q6PJG9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 SNURFL-201ENST00000309296 343 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 Y_RNA.26-201ENST00000362539 101 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 Y_RNA.60-201ENST00000362831 98 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 RNU1-76P-201ENST00000362903 159 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 RNU6-806P-201ENST00000365147 105 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 RNU6-611P-201ENST00000384276 104 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 Y_RNA.478-201ENST00000384358 107 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 MIR10A-201ENST00000385043 110 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 MIR34A-201ENST00000385130 110 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 SNORA77-201ENST00000408716 125 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 CYP4F29P-201ENST00000420685 446 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC139712.2-201ENST00000424302 339 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AL132765.1-201ENST00000434165 553 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 RN7SL727P-201ENST00000482164 296 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 RN7SL214P-201ENST00000487317 265 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC008953.1-201ENST00000497334 318 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 HMGB1P22-201ENST00000505315 124 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 HMGB2P1-201ENST00000591146 634 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 SNRPGP15-201ENST00000600149 222 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AP002826.1-201ENST00000608835 315 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC096772.1-201ENST00000609146 564 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC009318.2-201ENST00000610917 651 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AL161629.2-201ENST00000615347 275 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 AC243829.7-201ENST00000633081 225 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 Z73965.1-201ENST00000623412 2297 ntBASIC4.46□□□□□ -1.7
LRFN4Q6PJG9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.45□□□□□ -1.7
LRFN4Q6PJG9 TLK1P1-201ENST00000456760 2440 ntBASIC4.45□□□□□ -1.7
LRFN4Q6PJG9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LRFN4Q6PJG9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRFN4Q6PJG9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms