Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BX323014.1-201ENST00000412876 237 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 MED13P1-201ENST00000428342 171 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AP000907.1-201ENST00000428428 510 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 SNORD105B-201ENST00000458770 79 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 RNU6-333P-201ENST00000459117 107 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC096576.1-201ENST00000489014 359 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AP005639.2-201ENST00000527592 928 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 COX6CP3-201ENST00000580869 223 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC006130.2-201ENST00000586202 326 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AP001836.1-201ENST00000604675 523 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC039056.2-201ENST00000622261 511 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 AC091925.2-201ENST00000625059 256 ntBASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ZNF549Q6P9A3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AL513302.2-201ENST00000562313 1842 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 HSPE1P11-201ENST00000339579 310 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AL590004.1-201ENST00000405321 300 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 TXNP7-201ENST00000406296 293 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RPS15AP40-201ENST00000419621 391 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 MTCO2P12-201ENST00000427426 682 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 OR2AS1P-201ENST00000427827 319 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AL118520.1-201ENST00000450770 291 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RPL37P6-202ENST00000464216 403 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 MRPS17P3-201ENST00000465453 385 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC126389.1-201ENST00000477436 290 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC020593.1-201ENST00000507399 299 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RNU4-29P-201ENST00000515943 174 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP18-201ENST00000516005 275 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RNU6-27P-201ENST00000516146 107 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 SNORA70.19-201ENST00000516717 90 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP234-201ENST00000517173 224 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RNU1-45P-201ENST00000517191 141 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 BNIP3P6-201ENST00000549284 499 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC128657.1-201ENST00000549459 145 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AL133153.1-201ENST00000557756 303 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC020661.2-201ENST00000560114 134 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 AC009093.8-201ENST00000641769 292 ntBASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.43□□□□□ -1.86
ZNF549Q6P9A3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RNU6-552P-201ENST00000362869 119 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 SNORA73.2-201ENST00000364946 201 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AP002088.1-201ENST00000382740 395 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 MIR124-3-201ENST00000384866 87 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 MIR153-1-201ENST00000384914 90 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 SNORA48.7-201ENST00000391302 135 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms