Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RN7SKP142-201ENST00000411236 328 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AL359704.1-201ENST00000411586 781 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 BTF3L4P1-201ENST00000413813 468 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AL137014.1-201ENST00000420490 1226 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.55□□□□□ -2
ZNF544Q6NX49 AL139132.1-201ENST00000431587 344 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC112653.1-201ENST00000443851 386 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 MTCO1P42-201ENST00000457379 726 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 snoU13.4-201ENST00000458916 104 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.55□□□□□ -2
ZNF544Q6NX49 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.55□□□□□ -2
ZNF544Q6NX49 AC010424.1-201ENST00000506336 297 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 CBX3P3-201ENST00000508108 532 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 MTCO3P28-201ENST00000513351 515 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC116347.2-201ENST00000514912 523 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 SCGB1D5P-201ENST00000515134 247 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.55□□□□□ -2
ZNF544Q6NX49 AC022878.1-201ENST00000530684 149 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC087481.2-201ENST00000565492 330 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 TPMTP1-201ENST00000592307 737 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC020895.1-201ENST00000595362 272 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC011451.2-201ENST00000604303 598 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.55□□□□□ -2
ZNF544Q6NX49 MIR6130-201ENST00000619419 109 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC009878.1-201ENST00000621819 340 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 AC011460.1-201ENST00000636268 1834 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.55□□□□□ -2
ZNF544Q6NX49 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZNF544Q6NX49 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF544Q6NX49 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
ZNF544Q6NX49 Y_RNA.46-201ENST00000362695 102 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 Y_RNA.510-201ENST00000384511 114 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 RNY3P10-201ENST00000384764 102 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL356057.2-201ENST00000403318 432 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 MTND1P21-201ENST00000412991 285 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 RPL21P32-201ENST00000419877 477 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 RPS20P5-201ENST00000434808 360 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL353706.1-201ENST00000436728 494 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 PGBD4P3-201ENST00000440731 581 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL049734.2-201ENST00000441066 616 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 MRPL50P4-201ENST00000446432 475 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.54□□□□□ -2
ZNF544Q6NX49 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
ZNF544Q6NX49 KC877373.1-201ENST00000479066 408 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC112204.1-201ENST00000502591 103 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC096751.1-202ENST00000502691 1067 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 MTND4P2-201ENST00000507767 1203 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AP002748.2-201ENST00000528671 348 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AP002963.1-201ENST00000530590 184 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AP000873.5-201ENST00000533906 236 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC126177.3-201ENST00000551839 688 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC040904.1-201ENST00000590850 223 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 RSL24D1P11-201ENST00000591045 491 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL031176.1-201ENST00000604554 466 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 NUTF2P8-201ENST00000604593 363 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 RN7SKP299-201ENST00000606679 301 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC027807.2-201ENST00000616099 408 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC012150.2-201ENST00000621300 544 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AC079597.1-201ENST00000624306 508 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AC099654.13-201ENST00000639774 207 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 AL138713.1-201ENST00000624026 2130 ntBASIC2.54□□□□□ -2
ZNF544Q6NX49 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.54□□□□□ -2
ZNF544Q6NX49 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
ZNF544Q6NX49 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.53□□□□□ -2
ZNF544Q6NX49 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 Y_RNA.318-201ENST00000365131 97 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 RNU6-533P-201ENST00000384144 107 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 MIR135A2-201ENST00000384854 100 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 RPS20P2-201ENST00000402520 389 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC078974.1-201ENST00000411597 223 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 MTCO3P12-201ENST00000416718 547 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC016907.1-201ENST00000419483 435 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AL645937.1-202ENST00000421799 937 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AL353777.1-201ENST00000425552 326 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AL356583.2-201ENST00000426536 280 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms