Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 RPS3AP1-201ENST00000413190 320 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 FO393415.2-201ENST00000480085 343 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC026371.1-201ENST00000551867 419 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 OR4G3P-201ENST00000633500 913 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL136520.1-201ENST00000600311 1322 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 MTCO1P7-201ENST00000419523 1542 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC008676.3-201ENST00000521237 435 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL139286.1-201ENST00000604465 483 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 MTND5P4-201ENST00000514978 288 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 RNU1-40P-201ENST00000516816 164 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 RNU1-97P-201ENST00000516872 164 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC024060.1-201ENST00000607052 494 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL049641.1-201ENST00000441055 1948 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 Y_RNA.493-201ENST00000384422 102 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 BTF3P11-201ENST00000426582 477 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 RPS27P1-201ENST00000450552 247 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AL590365.1-201ENST00000450788 243 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 RPL21P39-201ENST00000463605 483 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 AC093027.1-201ENST00000546698 429 ntBASIC0.58□□□□□ -2.32
UBR4Q5T4S7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.58□□□□□ -2.32
UBR4Q5T4S7 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 RPL21P90-201ENST00000415692 466 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC073614.1-201ENST00000438690 650 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC025918.2-201ENST00000558683 763 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 CCT4P2-201ENST00000233836 1548 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 HMGN2P35-201ENST00000412164 270 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC025755.1-201ENST00000521306 278 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AL034418.1-201ENST00000448675 860 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC010928.2-201ENST00000588017 287 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 ELOCP5-201ENST00000604924 333 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 MIR587-201ENST00000384845 96 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 RPL23AP32-201ENST00000395315 459 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
UBR4Q5T4S7 MIR7974-201ENST00000615835 79 ntBASIC0.57□□□□□ -2.32
UBR4Q5T4S7 AC092902.1-201ENST00000486999 259 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 MIR3935-201ENST00000583472 104 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC012676.2-201ENST00000619258 186 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 MIR635-201ENST00000384830 98 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 MIR938-201ENST00000401216 83 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 RPL23AP95-201ENST00000426806 265 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 BNIP3P31-201ENST00000604515 566 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 RNU6-203P-201ENST00000384038 104 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 OR6C66P-201ENST00000414917 930 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 OR51B8P-201ENST00000449892 769 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC009712.1-201ENST00000564938 316 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AL590099.1-201ENST00000615276 138 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC021755.4-201ENST00000616620 456 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 SNORA50A-202ENST00000629536 136 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AL162388.1-201ENST00000450912 352 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.56□□□□□ -2.32
UBR4Q5T4S7 AC067852.7-201ENST00000623270 535 ntBASIC0.56□□□□□ -2.32
UBR4Q5T4S7 TPTE2P4-201ENST00000258589 1605 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 RNA5SP63-201ENST00000391225 112 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 RPL30P14-201ENST00000482744 348 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC021146.9-201ENST00000512503 156 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC025465.4-201ENST00000513422 638 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AP005435.4-201ENST00000529514 284 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 DPRXP5-201ENST00000604662 539 ntBASIC0.55□□□□□ -2.32
UBR4Q5T4S7 AC106900.2-201ENST00000604994 317 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms