Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC002486.1-201ENST00000435098 391 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AL451074.3-201ENST00000437709 472 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 GPM6BP1-201ENST00000446387 144 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 FABP5P15-201ENST00000453566 214 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 SNORD27.1-201ENST00000516319 72 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RNU6-720P-201ENST00000516363 108 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 FAM92A1P1-201ENST00000528023 890 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 OR4R1P-201ENST00000529879 463 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 BNIP3P9-201ENST00000603714 553 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC022893.3-201ENST00000607665 437 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC007684.1-201ENST00000609671 477 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 FTX_3.1-201ENST00000610451 147 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AL359547.2-201ENST00000615810 418 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC022149.2-201ENST00000621061 203 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC093648.1-201ENST00000623546 606 ntBASIC3.66□□□□□ -1.82
CCDC38Q502W7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC38Q502W7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC38Q502W7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC38Q502W7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC38Q502W7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC38Q502W7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC38Q502W7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC38Q502W7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
CCDC38Q502W7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.65□□□□□ -1.82
CCDC38Q502W7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 RNA5SP383-201ENST00000362934 120 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 MIR454-201ENST00000390180 115 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC126124.2-201ENST00000413542 321 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 MTATP6P18-201ENST00000417994 673 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 HSPD1P21-201ENST00000436541 245 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 MTND1P1-201ENST00000445453 368 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 FABP5P13-201ENST00000452144 328 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 RNU2-27P-201ENST00000516185 142 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 Y_RNA.689-201ENST00000516589 107 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 SNORD59.2-201ENST00000516873 68 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 RNU6-143P-201ENST00000516942 93 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 AP000867.2-201ENST00000532468 320 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC022880.1-201ENST00000534017 973 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 AL359212.1-201ENST00000556608 614 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC006130.2-201ENST00000586202 326 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC245389.1-201ENST00000605141 529 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC130324.3-201ENST00000614165 542 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 AC084035.1-201ENST00000634543 607 ntBASIC3.65□□□□□ -1.83
CCDC38Q502W7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC38Q502W7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC38Q502W7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC38Q502W7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC233263.6-201ENST00000631132 1963 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 Y_RNA.1-201ENST00000352915 104 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 RNU6-61P-201ENST00000365528 109 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 RNU4-55P-201ENST00000410731 137 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 RNU6-387P-201ENST00000411331 105 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC068533.1-201ENST00000418542 415 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 SNRPEP9-201ENST00000436794 238 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 RPS3AP46-201ENST00000448352 682 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC38Q502W7 CECR9-201ENST00000453421 199 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 RPS4XP2-201ENST00000458402 793 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 MRPS17P3-201ENST00000465453 385 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 RN7SL542P-201ENST00000467147 294 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 MTCYBP20-201ENST00000524239 1129 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 EIF1P4-201ENST00000572664 335 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 AL391646.1-201ENST00000603860 190 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC004805.2-201ENST00000605382 482 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AL158209.2-201ENST00000619266 216 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC025034.2-201ENST00000623264 286 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 AC073308.1-201ENST00000623696 305 ntBASIC3.64□□□□□ -1.83
CCDC38Q502W7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms