Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX4Q33E94 HMGB1P14-201ENST00000557424 591 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX4Q33E94 AC090888.2-201ENST00000559765 1144 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 MYL12BP1-201ENST00000569826 507 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
RFX4Q33E94 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX4Q33E94 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX4Q33E94 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFX4Q33E94 DDX10P1-201ENST00000448545 1933 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC092125.1-201ENST00000562568 1995 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFX4Q33E94 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.3□□□□□ -2.04
RFX4Q33E94 AC007336.1-201ENST00000576365 3828 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC007785.2-201ENST00000598627 1916 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX4Q33E94 TPTE2P4-201ENST00000258589 1605 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RFX4Q33E94 RNU6-432P-201ENST00000384196 109 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL109755.1-201ENST00000401791 649 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RFX4Q33E94 RN7SKP140-201ENST00000411196 284 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC098592.1-201ENST00000419352 333 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC011233.1-201ENST00000422812 283 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL356867.1-201ENST00000429623 299 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC105272.1-201ENST00000438604 198 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC107083.1-201ENST00000439643 279 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 BNIP3P2-201ENST00000441221 577 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 MTATP6P30-201ENST00000443540 664 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL591719.1-201ENST00000444669 744 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 MTND2P24-201ENST00000453434 806 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.29□□□□□ -2.04
RFX4Q33E94 RPS15AP34-201ENST00000487776 387 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC055855.1-201ENST00000489563 579 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RFX4Q33E94 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 RNU6-840P-201ENST00000517275 65 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC068587.4-201ENST00000533893 186 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC243972.3-201ENST00000539655 198 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC090888.1-201ENST00000561335 1141 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 MTATP6P24-201ENST00000576835 677 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AP000811.1-201ENST00000603803 651 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC107214.2-201ENST00000608204 634 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC135507.2-201ENST00000612443 309 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC093838.1-201ENST00000613014 469 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC013476.2-201ENST00000614456 459 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC010133.1-201ENST00000615809 842 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC021755.4-201ENST00000616620 456 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AP000676.3-201ENST00000623299 569 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AC007671.2-201ENST00000637344 619 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.29□□□□□ -2.04
RFX4Q33E94 AL359693.1-201ENST00000614959 2407 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 AL049641.1-201ENST00000441055 1948 ntBASIC2.29□□□□□ -2.04
RFX4Q33E94 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.28□□□□□ -2.04
RFX4Q33E94 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC005336.3-201ENST00000623833 2679 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AL365361.1-201ENST00000566942 3481 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 SNORD62.1-201ENST00000362541 86 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 Y_RNA.97-201ENST00000363094 102 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RNU6-461P-201ENST00000364195 107 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.28□□□□□ -2.04
RFX4Q33E94 RNA5SP354-201ENST00000391247 136 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RPS4XP7-201ENST00000406274 780 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC078974.1-201ENST00000411597 223 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 SPA17P1-201ENST00000416656 452 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AL451054.2-201ENST00000420896 202 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RPL7L1P10-201ENST00000427790 463 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.28□□□□□ -2.04
RFX4Q33E94 MTCO3P45-201ENST00000443036 613 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RPL7P36-201ENST00000444633 681 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms