Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SF3B3Q15393 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SF3B3Q15393 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SF3B3Q15393 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.15□□□□□ -1.74
SF3B3Q15393 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.15□□□□□ -1.74
SF3B3Q15393 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
SF3B3Q15393 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SF3B3Q15393 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 Y_RNA.356-201ENST00000365475 113 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SF3B3Q15393 RNU6-767P-201ENST00000384132 107 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 RNU6-74P-201ENST00000384235 107 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 MIR1-2-201ENST00000384961 85 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SF3B3Q15393 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SF3B3Q15393 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.15□□□□□ -1.75
SF3B3Q15393 Z99755.1-201ENST00000414048 380 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 SDCBPP3-201ENST00000419629 891 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AC008850.1-201ENST00000427546 362 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AC137499.1-201ENST00000427602 88 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.15□□□□□ -1.75
SF3B3Q15393 RPL36AP53-201ENST00000432891 316 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 TIMM9P1-201ENST00000436122 256 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 UBE2V1P13-201ENST00000436983 439 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 BNIP3P2-201ENST00000441221 577 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.15□□□□□ -1.75
SF3B3Q15393 AC079781.2-201ENST00000446424 169 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.15□□□□□ -1.75
SF3B3Q15393 RPL7P23-201ENST00000493874 747 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.15□□□□□ -1.75
SF3B3Q15393 FGF7P4-201ENST00000509595 295 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 RNA5SP401-201ENST00000515920 127 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 SCARNA24.1-201ENST00000516465 137 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 MIR2114-201ENST00000516645 80 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 OR4P1P-201ENST00000530808 1136 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 OR5B19P-201ENST00000531766 928 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.15□□□□□ -1.75
SF3B3Q15393 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.15□□□□□ -1.75
SF3B3Q15393 AC011712.1-201ENST00000588959 234 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 KC877982.1-201ENST00000602313 470 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 HMGN2P28-201ENST00000606102 262 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AC135507.2-201ENST00000612443 309 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 AL159972.1-201ENST00000625150 448 ntBASIC4.15□□□□□ -1.75
SF3B3Q15393 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SF3B3Q15393 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SF3B3Q15393 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SF3B3Q15393 AP001148.1-201ENST00000624124 2359 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 RPL7P26-201ENST00000333817 754 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 snosnR66.1-201ENST00000391095 99 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 RNU6-373P-201ENST00000411247 98 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC007390.1-201ENST00000415722 356 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AC093156.1-201ENST00000440382 670 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AL590399.6-201ENST00000446396 307 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AL353691.1-201ENST00000451332 387 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 RPS20P24-201ENST00000457473 361 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 SNORA59A-201ENST00000459326 152 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.14□□□□□ -1.75
SF3B3Q15393 RPS3AP50-201ENST00000487064 803 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.14□□□□□ -1.75
SF3B3Q15393 RNU6-410P-201ENST00000517006 107 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.14□□□□□ -1.75
SF3B3Q15393 OR5AL2P-201ENST00000532185 920 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.14□□□□□ -1.75
SF3B3Q15393 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AC098848.2-201ENST00000588023 330 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC025588.3-201ENST00000604182 274 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 AC004853.1-201ENST00000604902 698 ntBASIC4.14□□□□□ -1.75
SF3B3Q15393 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.14□□□□□ -1.75
SF3B3Q15393 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.14□□□□□ -1.75
SF3B3Q15393 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SF3B3Q15393 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.14□□□□□ -1.75
SF3B3Q15393 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 RNU6-223P-201ENST00000362830 107 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B3Q15393 RNU6-116P-201ENST00000384042 109 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SF3B3Q15393 RNU6-328P-201ENST00000390887 106 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 U3.29-201ENST00000391296 212 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 RNU2-15P-201ENST00000410692 191 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms