Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDH1Q08174 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDH1Q08174 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 RNU6-384P-201ENST00000364900 104 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDH1Q08174 AL357515.1-201ENST00000402967 542 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 LAP3P1-201ENST00000403648 294 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 Y_RNA.592-201ENST00000410274 109 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 RNU6-1025P-201ENST00000410629 104 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC093162.1-201ENST00000419682 124 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AL158156.1-201ENST00000422509 473 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC079780.1-201ENST00000428259 207 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH1Q08174 RPS17P8-201ENST00000434525 335 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 RPEP5-201ENST00000441137 268 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC073850.1-201ENST00000449243 255 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH1Q08174 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH1Q08174 RN7SL319P-201ENST00000480656 221 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AL049874.1-201ENST00000489560 388 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 RN7SL558P-201ENST00000497468 299 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDH1Q08174 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH1Q08174 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDH1Q08174 MIR4458-201ENST00000578872 75 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC008962.1-201ENST00000605729 304 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC004852.3-201ENST00000614131 326 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AC099669.2-201ENST00000616549 437 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AL731566.2-201ENST00000618971 317 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 AP002799.1-201ENST00000623552 423 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDH1Q08174 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH1Q08174 AC015813.6-201ENST00000624409 5808 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PCDH1Q08174 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDH1Q08174 AL049555.1-201ENST00000562834 1933 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDH1Q08174 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 OR51H2P-202ENST00000641424 3046 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PCDH1Q08174 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDH1Q08174 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 AC007685.1-201ENST00000329806 452 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 MIR412-201ENST00000362142 91 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 RNU1-76P-201ENST00000362903 159 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 Y_RNA.105-201ENST00000363182 111 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDH1Q08174 AL133270.1-201ENST00000402635 279 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AL080315.1-201ENST00000406055 466 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 RN7SKP125-201ENST00000410481 302 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 SNORD56-201ENST00000413522 71 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AL592148.1-201ENST00000413568 445 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 RPL21P38-201ENST00000418090 167 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AC087650.1-201ENST00000431445 468 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 RPL23AP56-201ENST00000460778 453 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 RN7SL329P-201ENST00000467740 299 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 RPL7P5-201ENST00000471472 736 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDH1Q08174 AC084851.1-201ENST00000529105 249 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDH1Q08174 RRN3P3-201ENST00000549207 578 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDH1Q08174 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
PCDH1Q08174 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDH1Q08174 RNF138P2-201ENST00000603490 592 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 MIR8076-201ENST00000611401 83 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 NCAPGP1-201ENST00000505112 1814 ntBASIC4.71□□□□□ -1.66
PCDH1Q08174 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDH1Q08174 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCDH1Q08174 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PCDH1Q08174 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDH1Q08174 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDH1Q08174 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 OR4G2P-202ENST00000641004 1759 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDH1Q08174 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PCDH1Q08174 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 Y_RNA.20-201ENST00000362479 113 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RNU6-173P-201ENST00000364215 104 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RNA5SP455-201ENST00000365190 119 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RNU6-827P-201ENST00000365553 106 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 Y_RNA.416-201ENST00000384014 113 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 MIR514A1-201ENST00000385133 98 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms