Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 PSPHP1-201ENST00000450062 261 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN7AQ01118 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN7AQ01118 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AL121821.2-201ENST00000556081 394 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AP001486.3-201ENST00000615334 372 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC025048.6-202ENST00000627667 438 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SCN7AQ01118 DDX43P2-201ENST00000604753 1354 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN7AQ01118 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SCN7AQ01118 MIR532-201ENST00000385025 91 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AP000949.1-201ENST00000438328 629 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC093852.1-201ENST00000503587 266 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN7AQ01118 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.29□□□□□ -2.2
SCN7AQ01118 AC092474.3-201ENST00000603022 568 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 AL096840.1-201ENST00000603287 93 ntBASIC1.29□□□□□ -2.2
SCN7AQ01118 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SCN7AQ01118 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SCN7AQ01118 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN7AQ01118 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN7AQ01118 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN7AQ01118 HMGN2P10-201ENST00000448085 265 ntBASIC1.28□□□□□ -2.2
SCN7AQ01118 TRGVB-201ENST00000453257 471 ntBASIC1.28□□□□□ -2.2
SCN7AQ01118 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN7AQ01118 RPL31P58-201ENST00000469001 379 ntBASIC1.28□□□□□ -2.2
SCN7AQ01118 AC090616.3-201ENST00000582184 217 ntBASIC1.28□□□□□ -2.2
SCN7AQ01118 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.28□□□□□ -2.2
SCN7AQ01118 AC025594.3-201ENST00000613068 790 ntBASIC1.28□□□□□ -2.2
SCN7AQ01118 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
SCN7AQ01118 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
SCN7AQ01118 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SCN7AQ01118 RNU1-105P-201ENST00000363470 161 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 CISD1P1-201ENST00000393907 327 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 OR51A5P-201ENST00000415429 942 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN7AQ01118 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN7AQ01118 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN7AQ01118 GPM6BP3-201ENST00000442797 145 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 AL034418.1-201ENST00000448675 860 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 SNRPGP6-201ENST00000451124 220 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN7AQ01118 RNU7-26P-201ENST00000458980 63 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN7AQ01118 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.27□□□□□ -2.21
SCN7AQ01118 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SCN7AQ01118 CR848007.1-201ENST00000442354 1699 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 AC009902.3-201ENST00000606235 2172 ntBASIC1.27□□□□□ -2.21
SCN7AQ01118 AL137003.2-201ENST00000606924 2538 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
SCN7AQ01118 Y_RNA.393-201ENST00000383936 102 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 HMGB3P31-201ENST00000413333 595 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN7AQ01118 ARF4P4-201ENST00000439608 520 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AC010099.1-201ENST00000455434 375 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 TPRKBP1-201ENST00000456243 481 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 RPL31P41-201ENST00000477967 372 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AC022880.1-201ENST00000534017 973 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AC087481.2-201ENST00000565492 330 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AL020996.3-201ENST00000606617 222 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN7AQ01118 HMGB1P24-202ENST00000615653 685 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN7AQ01118 AC008133.2-201ENST00000624540 351 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 RNU6-920P-201ENST00000410926 92 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AL356320.2-201ENST00000417263 507 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 THAP5P1-201ENST00000439089 262 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 SNORA31.16-201ENST00000516773 139 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 SNRPGP16-201ENST00000533275 226 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN7AQ01118 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN7AQ01118 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN7AQ01118 MIR5571-201ENST00000577998 113 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN7AQ01118 AC012254.4-201ENST00000588843 273 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 SNORD114-21-201ENST00000606412 72 ntBASIC1.26□□□□□ -2.21
SCN7AQ01118 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN7AQ01118 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.25□□□□□ -2.21
SCN7AQ01118 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SCN7AQ01118 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SCN7AQ01118 RNY1P4-201ENST00000384595 115 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN7AQ01118 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SCN7AQ01118 TRIM60P13-201ENST00000432350 1283 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.25□□□□□ -2.21
SCN7AQ01118 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN7AQ01118 GDI2P2-201ENST00000445131 608 ntBASIC1.25□□□□□ -2.21
SCN7AQ01118 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
SCN7AQ01118 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN7AQ01118 DPRXP5-201ENST00000604662 539 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms