Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC026634.1-201ENST00000634369 198 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AC010889.1-201ENST00000566193 2666 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
H3F3AP84243 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
H3F3AP84243 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
H3F3AP84243 AL109755.1-201ENST00000401791 649 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AL450338.1-201ENST00000407987 512 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
H3F3AP84243 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 RPL30P4-201ENST00000429309 333 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 HMGN2P3-201ENST00000433603 273 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 HMGN2P5-201ENST00000436882 273 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 RPL7P54-201ENST00000438336 674 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 HMGB3P17-201ENST00000504195 649 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 HMGN1P28-201ENST00000521340 364 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.64□□□□□ -2.15
H3F3AP84243 AC007375.1-201ENST00000554513 578 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
H3F3AP84243 AC090897.2-201ENST00000581715 130 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 BNIP3P24-201ENST00000593398 557 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 RPP40P2-201ENST00000603596 712 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AC004853.1-201ENST00000604902 698 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AC005858.4-201ENST00000623191 700 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 AP002791.1-201ENST00000623291 381 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.64□□□□□ -2.15
H3F3AP84243 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.64□□□□□ -2.15
H3F3AP84243 HSPA8P4-201ENST00000511877 1920 ntBASIC1.64□□□□□ -2.15
H3F3AP84243 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.63□□□□□ -2.15
H3F3AP84243 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
H3F3AP84243 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 RPL23AP29-201ENST00000397284 453 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 MIR888-201ENST00000401186 77 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 MIR1294-201ENST00000408503 142 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 RNA5SP489-201ENST00000410986 109 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.63□□□□□ -2.15
H3F3AP84243 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC003685.2-201ENST00000422795 395 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 PPP1R11P2-201ENST00000423543 382 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 BX276092.3-201ENST00000424182 230 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.63□□□□□ -2.15
H3F3AP84243 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 MTND2P5-201ENST00000432656 1006 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.63□□□□□ -2.15
H3F3AP84243 AL121890.1-201ENST00000435457 205 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 RPL35AP22-201ENST00000436855 335 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 HMGB3P12-201ENST00000438745 556 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC016691.1-201ENST00000441321 413 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 RNFT1P2-201ENST00000443064 757 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
H3F3AP84243 AL136380.1-201ENST00000447970 162 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC080013.2-201ENST00000460866 323 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.63□□□□□ -2.15
H3F3AP84243 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.63□□□□□ -2.15
H3F3AP84243 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.63□□□□□ -2.15
H3F3AP84243 AC105245.1-201ENST00000581934 244 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 NRBF2P1-201ENST00000587407 859 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AL590099.1-201ENST00000615276 138 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC104307.1-201ENST00000616142 196 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC004009.2-201ENST00000623016 728 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 PISRT1-201ENST00000626175 531 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 U6.101-201ENST00000637707 76 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.63□□□□□ -2.15
H3F3AP84243 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
H3F3AP84243 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
H3F3AP84243 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.62□□□□□ -2.15
H3F3AP84243 RNU6-839P-201ENST00000363347 108 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 MIR1261-201ENST00000408659 82 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 AL445183.3-201ENST00000414168 502 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
H3F3AP84243 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.62□□□□□ -2.15
H3F3AP84243 AC007742.1-201ENST00000425789 329 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.62□□□□□ -2.15
H3F3AP84243 MTCYBP45-201ENST00000435243 565 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 ELOCP26-201ENST00000436067 329 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.62□□□□□ -2.15
H3F3AP84243 AC005297.2-201ENST00000450430 606 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.62□□□□□ -2.15
H3F3AP84243 snoU13.26-201ENST00000459452 105 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
H3F3AP84243 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.62□□□□□ -2.15
H3F3AP84243 AC008526.1-201ENST00000509149 338 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.62□□□□□ -2.15
H3F3AP84243 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 HSPA8P13-201ENST00000523715 472 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.62□□□□□ -2.15
H3F3AP84243 AC068276.1-201ENST00000605793 379 ntBASIC1.62□□□□□ -2.15
H3F3AP84243 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms