Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
RTP1P59025 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 AC032011.1-201ENST00000611703 1549 ntBASIC4.67□□□□□ -1.66
RTP1P59025 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RTP1P59025 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.67□□□□□ -1.66
RTP1P59025 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
RTP1P59025 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RTP1P59025 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 Y_RNA.252-201ENST00000364556 101 ntBASIC4.67□□□□□ -1.66
RTP1P59025 Y_RNA.364-201ENST00000365532 101 ntBASIC4.67□□□□□ -1.66
RTP1P59025 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 RNU6-754P-201ENST00000391166 107 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AL109755.1-201ENST00000401791 649 ntBASIC4.67□□□□□ -1.66
RTP1P59025 MIR1302-3-201ENST00000408128 138 ntBASIC4.67□□□□□ -1.66
RTP1P59025 RNU2-47P-201ENST00000410649 186 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 AL353748.1-201ENST00000440753 474 ntBASIC4.67□□□□□ -1.66
RTP1P59025 PPIAP3-201ENST00000450588 505 ntBASIC4.67□□□□□ -1.66
RTP1P59025 HMGB3P21-201ENST00000452483 547 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 RPL5P30-201ENST00000465511 891 ntBASIC4.67□□□□□ -1.66
RTP1P59025 RN7SL283P-201ENST00000489055 303 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC110792.1-201ENST00000491826 472 ntBASIC4.67□□□□□ -1.66
RTP1P59025 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 AC108145.1-201ENST00000503770 153 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC110768.1-201ENST00000509222 400 ntBASIC4.67□□□□□ -1.66
RTP1P59025 SNORA74D-201ENST00000516404 141 ntBASIC4.67□□□□□ -1.66
RTP1P59025 RNU6-1016P-201ENST00000516689 94 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.67□□□□□ -1.66
RTP1P59025 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.67□□□□□ -1.66
RTP1P59025 AC090115.3-201ENST00000553218 849 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 MTCO3P23-201ENST00000561363 289 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.67□□□□□ -1.66
RTP1P59025 MIR3200-201ENST00000580767 85 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC005255.1-201ENST00000593748 216 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC007566.2-201ENST00000603642 413 ntBASIC4.67□□□□□ -1.66
RTP1P59025 NUTF2P8-201ENST00000604593 363 ntBASIC4.67□□□□□ -1.66
RTP1P59025 ATP1B3P1-201ENST00000605365 821 ntBASIC4.67□□□□□ -1.66
RTP1P59025 AC019176.2-201ENST00000611579 315 ntBASIC4.67□□□□□ -1.66
RTP1P59025 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.67□□□□□ -1.66
RTP1P59025 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTP1P59025 GABPAP-201ENST00000419271 1356 ntBASIC4.66□□□□□ -1.66
RTP1P59025 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 RNU1-108P-201ENST00000362556 161 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNU6-562P-201ENST00000362731 107 ntBASIC4.66□□□□□ -1.66
RTP1P59025 SNORD3E-201ENST00000362899 217 ntBASIC4.66□□□□□ -1.66
RTP1P59025 Y_RNA.176-201ENST00000363815 109 ntBASIC4.66□□□□□ -1.66
RTP1P59025 Y_RNA.188-201ENST00000363952 111 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNU6-26P-201ENST00000383985 107 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNY1P14-201ENST00000384426 108 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNU6-1222P-201ENST00000384615 107 ntBASIC4.66□□□□□ -1.66
RTP1P59025 MIR491-201ENST00000384877 84 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNU6-328P-201ENST00000390887 106 ntBASIC4.66□□□□□ -1.66
RTP1P59025 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.66□□□□□ -1.66
RTP1P59025 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.66□□□□□ -1.66
RTP1P59025 CALM2P2-201ENST00000428512 440 ntBASIC4.66□□□□□ -1.66
RTP1P59025 USP9YP16-201ENST00000430287 407 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.66□□□□□ -1.66
RTP1P59025 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.66□□□□□ -1.66
RTP1P59025 PTMAP3-201ENST00000447474 330 ntBASIC4.66□□□□□ -1.66
RTP1P59025 USP9YP23-201ENST00000455085 407 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RPS20P21-201ENST00000466859 343 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RPS27AP1-201ENST00000475545 471 ntBASIC4.66□□□□□ -1.66
RTP1P59025 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.66□□□□□ -1.66
RTP1P59025 RPL23AP55-201ENST00000498163 452 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.66□□□□□ -1.66
RTP1P59025 TBCAP3-201ENST00000512475 312 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.66□□□□□ -1.66
RTP1P59025 RANP3-201ENST00000530970 276 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.66□□□□□ -1.66
RTP1P59025 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.66□□□□□ -1.66
RTP1P59025 MIR5692C1-201ENST00000585309 91 ntBASIC4.66□□□□□ -1.66
RTP1P59025 BNIP3P16-201ENST00000589779 534 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AL669831.4-202ENST00000590817 238 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AC096577.2-201ENST00000611455 153 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AC006157.1-201ENST00000611750 366 ntBASIC4.66□□□□□ -1.66
RTP1P59025 MIR6128-201ENST00000615528 109 ntBASIC4.66□□□□□ -1.66
RTP1P59025 LINC00901.1-201ENST00000617252 152 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AC009093.8-201ENST00000641769 292 ntBASIC4.66□□□□□ -1.66
RTP1P59025 AL732372.2-225ENST00000642124 456 ntBASIC4.66□□□□□ -1.66
RTP1P59025 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RTP1P59025 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RTP1P59025 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms