Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC068587.4-201ENST00000533893 186 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX1P55347 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.41□□□□□ -2.02
PKNOX1P55347 HMGN2P15-201ENST00000585707 270 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC007038.2-201ENST00000608095 740 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 FTX_3.1-201ENST00000610451 147 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.41□□□□□ -2.02
PKNOX1P55347 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC097655.1-201ENST00000635075 318 ntBASIC2.41□□□□□ -2.02
PKNOX1P55347 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX1P55347 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.41□□□□□ -2.02
PKNOX1P55347 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PKNOX1P55347 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.4□□□□□ -2.02
PKNOX1P55347 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
PKNOX1P55347 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PKNOX1P55347 OR5J1P-201ENST00000313544 939 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RPS4XP7-201ENST00000406274 780 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.4□□□□□ -2.03
PKNOX1P55347 MTND1P20-201ENST00000430341 950 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC092427.1-202ENST00000430569 476 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC010153.1-201ENST00000432862 727 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 UBE2FP3-201ENST00000436366 524 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC005094.1-201ENST00000440420 368 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RPS3AP12-201ENST00000443616 753 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 OR6C5P-201ENST00000452388 923 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RPL12P25-201ENST00000455592 494 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 RPL31P41-201ENST00000477967 372 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PKNOX1P55347 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.4□□□□□ -2.03
PKNOX1P55347 AC110760.3-202ENST00000515177 371 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RN7SKP132-201ENST00000516001 208 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RNA5SP291-201ENST00000517222 105 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 RNU1-104P-201ENST00000517280 175 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
PKNOX1P55347 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 AL354943.1-201ENST00000572103 781 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC005498.1-201ENST00000592125 465 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC004908.2-201ENST00000609090 574 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AL355472.4-201ENST00000610233 626 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 UCA1.1-201ENST00000620952 75 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AP002782.1-201ENST00000623107 614 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 AC092608.2-201ENST00000624427 218 ntBASIC2.4□□□□□ -2.03
PKNOX1P55347 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.4□□□□□ -2.03
PKNOX1P55347 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.4□□□□□ -2.03
PKNOX1P55347 ZNF833P-201ENST00000424938 1494 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
PKNOX1P55347 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 Y_RNA.302-201ENST00000364997 102 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 RNU6-1200P-201ENST00000384162 107 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AL139397.2-201ENST00000404529 772 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AL513475.1-201ENST00000406602 315 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 RPL22P18-201ENST00000417197 377 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.39□□□□□ -2.03
PKNOX1P55347 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 USP12PX-201ENST00000432383 1057 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 RPL7P36-201ENST00000444633 681 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 ELOCP30-201ENST00000447108 299 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PKNOX1P55347 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.39□□□□□ -2.03
PKNOX1P55347 RNU7-59P-201ENST00000459101 61 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.39□□□□□ -2.03
PKNOX1P55347 RPS29P20-201ENST00000489592 171 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.39□□□□□ -2.03
PKNOX1P55347 RNU6-927P-201ENST00000516199 100 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 RNU6-390P-201ENST00000516259 103 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 ATP5F1P5-201ENST00000526403 760 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 OR4R1P-201ENST00000529879 463 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC007115.1-201ENST00000546853 234 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.39□□□□□ -2.03
PKNOX1P55347 MIR4293-201ENST00000584305 78 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 MIR4999-201ENST00000585029 91 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 DPPA3P3-201ENST00000603842 430 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AL161756.2-201ENST00000604597 246 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 AC091965.4-201ENST00000607691 587 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 TUSC7.1-201ENST00000610969 165 ntBASIC2.39□□□□□ -2.03
PKNOX1P55347 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PKNOX1P55347 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.39□□□□□ -2.03
PKNOX1P55347 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PKNOX1P55347 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.38□□□□□ -2.03
PKNOX1P55347 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PKNOX1P55347 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PKNOX1P55347 RNU4-28P-201ENST00000364739 141 ntBASIC2.38□□□□□ -2.03
PKNOX1P55347 MIR128-1-201ENST00000384921 82 ntBASIC2.38□□□□□ -2.03
PKNOX1P55347 AL359634.1-202ENST00000404721 284 ntBASIC2.38□□□□□ -2.03
PKNOX1P55347 AC078974.1-201ENST00000411597 223 ntBASIC2.38□□□□□ -2.03
PKNOX1P55347 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms