Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.97□□□□□ -1.93
LIMK2P53671 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIMK2P53671 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
LIMK2P53671 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIMK2P53671 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
LIMK2P53671 TEX21P-201ENST00000447107 1476 ntBASIC2.96□□□□□ -1.93
LIMK2P53671 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.96□□□□□ -1.93
LIMK2P53671 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 RNU5A-1-201ENST00000362698 116 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 RNU6-1215P-201ENST00000384441 102 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 RNU6-754P-201ENST00000391166 107 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 FAT1P1-201ENST00000406588 507 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 MIR1289-1-201ENST00000408836 144 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 RNU2-66P-201ENST00000410650 161 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.96□□□□□ -1.94
LIMK2P53671 ELOCP17-201ENST00000414751 326 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.96□□□□□ -1.94
LIMK2P53671 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMK2P53671 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMK2P53671 NDUFB4P6-201ENST00000436819 366 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC025750.2-201ENST00000442609 450 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMK2P53671 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMK2P53671 AL590664.1-201ENST00000448065 339 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMK2P53671 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMK2P53671 SRRM1P2-201ENST00000464531 1192 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AL049714.1-201ENST00000466686 347 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC107401.1-201ENST00000503426 685 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.96□□□□□ -1.94
LIMK2P53671 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.96□□□□□ -1.94
LIMK2P53671 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 AC116347.2-201ENST00000514912 523 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 FABP5P5-201ENST00000515537 406 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 SNORA31.1-201ENST00000515993 133 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 SNORA31.5-201ENST00000516190 133 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 RN7SKP272-201ENST00000516988 232 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.96□□□□□ -1.94
LIMK2P53671 AP002748.2-201ENST00000528671 348 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AP004247.1-201ENST00000531556 1289 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.96□□□□□ -1.94
LIMK2P53671 AC012119.1-201ENST00000603184 222 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 AL033523.1-201ENST00000605153 153 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 NDUFA8P1-201ENST00000605525 367 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AC027807.2-201ENST00000616099 408 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 AL138880.2-201ENST00000616214 239 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 MTND5P7-201ENST00000413558 1798 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIMK2P53671 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.96□□□□□ -1.94
LIMK2P53671 AC011460.1-201ENST00000636268 1834 ntBASIC2.96□□□□□ -1.94
LIMK2P53671 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LIMK2P53671 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RNU6-517P-201ENST00000384362 110 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 Y_RNA.516-201ENST00000384541 124 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RPS4XP3-201ENST00000398541 413 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RNU6-516P-201ENST00000411381 104 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 UBE2V1P10-201ENST00000414685 269 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.95□□□□□ -1.94
LIMK2P53671 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMK2P53671 TMEM167AP1-201ENST00000423409 219 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 RPL7P46-201ENST00000425129 740 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AL445669.1-201ENST00000426743 755 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMK2P53671 AC010975.2-201ENST00000427781 588 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 C8orf59P1-201ENST00000429930 303 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK2P53671 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMK2P53671 MTND1P4-201ENST00000435196 415 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
LIMK2P53671 RPS29P6-201ENST00000438196 145 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 GDI2P2-201ENST00000445131 608 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK2P53671 RPL37P25-201ENST00000507308 276 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 HMGN1P28-201ENST00000521340 364 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC013828.2-201ENST00000532487 235 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.95□□□□□ -1.94
LIMK2P53671 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMK2P53671 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK2P53671 MTCO3P24-201ENST00000572729 782 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK2P53671 MIR4513-201ENST00000581077 86 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 MIR544B-201ENST00000582372 78 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC005771.1-201ENST00000585581 349 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 BNIP3P23-201ENST00000599655 511 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AL133393.1-201ENST00000603277 287 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC091805.2-201ENST00000603848 235 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 BCRP9-201ENST00000605312 388 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC008498.1-201ENST00000613012 531 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMK2P53671 AC006111.3-201ENST00000622137 383 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AL603839.4-201ENST00000624658 1005 ntBASIC2.95□□□□□ -1.94
LIMK2P53671 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.94□□□□□ -1.94
LIMK2P53671 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.94□□□□□ -1.94
LIMK2P53671 AC027514.1-201ENST00000588561 1603 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms