Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SNORA20.2-201ENST00000383922 131 ntBASIC3.06□□□□□ -1.92
PDX1P52945 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PDX1P52945 AP000567.1-201ENST00000406413 156 ntBASIC3.06□□□□□ -1.92
PDX1P52945 RN7SKP140-201ENST00000411196 284 ntBASIC3.06□□□□□ -1.92
PDX1P52945 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 RPS15AP6-201ENST00000420703 385 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AL451054.2-201ENST00000420896 202 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AC010975.2-201ENST00000427781 588 ntBASIC3.06□□□□□ -1.92
PDX1P52945 RPL7L1P10-201ENST00000427790 463 ntBASIC3.06□□□□□ -1.92
PDX1P52945 NDUFB4P6-201ENST00000436819 366 ntBASIC3.06□□□□□ -1.92
PDX1P52945 ARPC3P1-201ENST00000437218 533 ntBASIC3.06□□□□□ -1.92
PDX1P52945 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
PDX1P52945 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 AC093156.1-201ENST00000440382 670 ntBASIC3.06□□□□□ -1.92
PDX1P52945 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
PDX1P52945 MTCYBP1-201ENST00000454315 1119 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.06□□□□□ -1.92
PDX1P52945 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 AC004924.1-201ENST00000480160 781 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AC082651.2-201ENST00000496833 166 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDX1P52945 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 AL359273.1-201ENST00000510918 627 ntBASIC3.06□□□□□ -1.92
PDX1P52945 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 RN7SKP298-201ENST00000515950 94 ntBASIC3.06□□□□□ -1.92
PDX1P52945 Vault.3-201ENST00000516676 95 ntBASIC3.06□□□□□ -1.92
PDX1P52945 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.06□□□□□ -1.92
PDX1P52945 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
PDX1P52945 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PDX1P52945 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.06□□□□□ -1.92
PDX1P52945 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.06□□□□□ -1.92
PDX1P52945 MIR7106-201ENST00000612419 65 ntBASIC3.06□□□□□ -1.92
PDX1P52945 HULC.1-201ENST00000612720 240 ntBASIC3.06□□□□□ -1.92
PDX1P52945 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.06□□□□□ -1.92
PDX1P52945 AC068880.5-201ENST00000624331 290 ntBASIC3.06□□□□□ -1.92
PDX1P52945 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PDX1P52945 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.06□□□□□ -1.92
PDX1P52945 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PDX1P52945 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
PDX1P52945 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.06□□□□□ -1.92
PDX1P52945 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
PDX1P52945 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PDX1P52945 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.05□□□□□ -1.92
PDX1P52945 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.05□□□□□ -1.92
PDX1P52945 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PDX1P52945 RNU6-1284P-201ENST00000363701 100 ntBASIC3.05□□□□□ -1.92
PDX1P52945 U3.11-201ENST00000364476 212 ntBASIC3.05□□□□□ -1.92
PDX1P52945 RNU6-282P-201ENST00000365357 103 ntBASIC3.05□□□□□ -1.92
PDX1P52945 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 RNU2-62P-201ENST00000410868 191 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 NDUFB4P7-201ENST00000423198 363 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC104651.1-201ENST00000427559 735 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.05□□□□□ -1.92
PDX1P52945 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 USP12PX-201ENST00000432383 1057 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.05□□□□□ -1.92
PDX1P52945 MTCO3P5-201ENST00000433620 714 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.05□□□□□ -1.92
PDX1P52945 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.05□□□□□ -1.92
PDX1P52945 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.05□□□□□ -1.92
PDX1P52945 AC020550.1-201ENST00000447385 163 ntBASIC3.05□□□□□ -1.92
PDX1P52945 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 RPS23P3-201ENST00000470993 430 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 AC138853.1-201ENST00000503549 823 ntBASIC3.05□□□□□ -1.92
PDX1P52945 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.05□□□□□ -1.92
PDX1P52945 CDC42P4-201ENST00000510507 563 ntBASIC3.05□□□□□ -1.92
PDX1P52945 SCARNA15.2-201ENST00000516409 127 ntBASIC3.05□□□□□ -1.92
PDX1P52945 MTCO2P4-201ENST00000517968 247 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AP002404.1-201ENST00000532005 451 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC022880.1-201ENST00000534017 973 ntBASIC3.05□□□□□ -1.92
PDX1P52945 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.05□□□□□ -1.92
PDX1P52945 AP005205.1-201ENST00000563503 508 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.05□□□□□ -1.92
PDX1P52945 NRBF2P1-201ENST00000587407 859 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC079089.3-201ENST00000603094 673 ntBASIC3.05□□□□□ -1.92
PDX1P52945 NDUFA8P1-201ENST00000605525 367 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC005332.10-201ENST00000612725 619 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AC013476.2-201ENST00000614456 459 ntBASIC3.05□□□□□ -1.92
PDX1P52945 AL137790.1-201ENST00000634283 177 ntBASIC3.05□□□□□ -1.92
PDX1P52945 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDX1P52945 CR848007.1-201ENST00000442354 1699 ntBASIC3.04□□□□□ -1.92
PDX1P52945 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms