Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 CEP170P1-201ENST00000502249 4587 ntBASIC3.79□□□□□ -1.8
NEK3P51956 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 SNORA5A-201ENST00000384111 134 ntBASIC3.79□□□□□ -1.8
NEK3P51956 RNA5SP252-201ENST00000391131 119 ntBASIC3.79□□□□□ -1.8
NEK3P51956 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.79□□□□□ -1.8
NEK3P51956 RPL26P27-201ENST00000414397 437 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.79□□□□□ -1.8
NEK3P51956 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
NEK3P51956 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 AL592045.1-201ENST00000429867 352 ntBASIC3.79□□□□□ -1.8
NEK3P51956 NEK4P1-201ENST00000433383 879 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.79□□□□□ -1.8
NEK3P51956 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.79□□□□□ -1.8
NEK3P51956 AC003071.1-201ENST00000451219 789 ntBASIC3.79□□□□□ -1.8
NEK3P51956 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.79□□□□□ -1.8
NEK3P51956 RNU6-1315P-201ENST00000517187 99 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AP003122.3-201ENST00000526316 255 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AP001893.2-201ENST00000526949 202 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AC084851.1-201ENST00000529105 249 ntBASIC3.79□□□□□ -1.8
NEK3P51956 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 AC008521.1-201ENST00000587471 187 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AC025449.1-201ENST00000603896 529 ntBASIC3.79□□□□□ -1.8
NEK3P51956 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK3P51956 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NEK3P51956 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.79□□□□□ -1.8
NEK3P51956 ZNF680P1-201ENST00000436625 1469 ntBASIC3.79□□□□□ -1.8
NEK3P51956 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
NEK3P51956 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.79□□□□□ -1.8
NEK3P51956 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NEK3P51956 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
NEK3P51956 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
NEK3P51956 SNORD115-7-201ENST00000365306 82 ntBASIC3.78□□□□□ -1.8
NEK3P51956 NDUFS5P4-201ENST00000412983 318 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC009237.5-201ENST00000414271 501 ntBASIC3.78□□□□□ -1.8
NEK3P51956 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK3P51956 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NEK3P51956 HMGN2P30-201ENST00000423237 256 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AL714022.1-201ENST00000439897 151 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK3P51956 AC034236.1-201ENST00000469891 373 ntBASIC3.78□□□□□ -1.8
NEK3P51956 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.78□□□□□ -1.8
NEK3P51956 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
NEK3P51956 RNA5SP503-201ENST00000517047 117 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.78□□□□□ -1.8
NEK3P51956 AC007991.1-201ENST00000522680 631 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NEK3P51956 OR5AL2P-201ENST00000532185 920 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.78□□□□□ -1.8
NEK3P51956 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.78□□□□□ -1.8
NEK3P51956 MIR4444-1-201ENST00000581696 74 ntBASIC3.78□□□□□ -1.8
NEK3P51956 MIR4444-2-201ENST00000584390 74 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK3P51956 KLKP1-201ENST00000595979 403 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC244505.7-201ENST00000599675 272 ntBASIC3.78□□□□□ -1.8
NEK3P51956 SNORA62.6-201ENST00000606322 83 ntBASIC3.78□□□□□ -1.8
NEK3P51956 SNORA51-201ENST00000606420 132 ntBASIC3.78□□□□□ -1.8
NEK3P51956 MIR15A-201ENST00000607334 83 ntBASIC3.78□□□□□ -1.8
NEK3P51956 RMST_8.1-201ENST00000610287 165 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AL359880.1-201ENST00000621879 266 ntBASIC3.78□□□□□ -1.8
NEK3P51956 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NEK3P51956 AL512643.1-201ENST00000635735 524 ntBASIC3.78□□□□□ -1.8
NEK3P51956 Z99571.1-201ENST00000636677 394 ntBASIC3.78□□□□□ -1.8
NEK3P51956 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NEK3P51956 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NEK3P51956 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
NEK3P51956 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NEK3P51956 SNORA73.2-201ENST00000364946 201 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MIR184-201ENST00000384962 84 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MIR449B-201ENST00000384995 97 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MTCO3P40-201ENST00000392516 676 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.77□□□□□ -1.81
NEK3P51956 AC092809.3-201ENST00000415453 231 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AL035423.1-201ENST00000420331 213 ntBASIC3.77□□□□□ -1.81
NEK3P51956 NDUFB1P1-201ENST00000435191 180 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.77□□□□□ -1.81
NEK3P51956 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.77□□□□□ -1.81
NEK3P51956 RPL37P4-201ENST00000448908 268 ntBASIC3.77□□□□□ -1.81
NEK3P51956 MTATP6P7-201ENST00000453315 681 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.77□□□□□ -1.81
NEK3P51956 TRBV1-201ENST00000476502 284 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.77□□□□□ -1.81
NEK3P51956 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.77□□□□□ -1.81
NEK3P51956 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.77□□□□□ -1.81
NEK3P51956 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.77□□□□□ -1.81
NEK3P51956 RNU6-123P-201ENST00000516163 102 ntBASIC3.77□□□□□ -1.81
NEK3P51956 RNU6-506P-201ENST00000516553 94 ntBASIC3.77□□□□□ -1.81
NEK3P51956 SNORA31.21-201ENST00000517180 77 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC026403.1-201ENST00000518938 295 ntBASIC3.77□□□□□ -1.81
NEK3P51956 AC022880.1-201ENST00000534017 973 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms