Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.01□□□□□ -1.61
RNF144AP50876 GAPDHP25-201ENST00000447061 1001 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 AL359073.1-201ENST00000448036 403 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 RPL23AP24-201ENST00000458203 385 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF144AP50876 AL049874.1-201ENST00000489560 388 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF144AP50876 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF144AP50876 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.01□□□□□ -1.61
RNF144AP50876 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 AC006001.4-201ENST00000622243 395 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 CU639417.4-201ENST00000623928 207 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 SCARNA4-201ENST00000629045 128 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RNF144AP50876 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RNF144AP50876 AC009541.1-201ENST00000438279 2662 ntBASIC5.01□□□□□ -1.61
RNF144AP50876 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF144AP50876 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF144AP50876 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5□□□□□ -1.61
RNF144AP50876 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 AC009812.4-201ENST00000569134 1805 ntBASIC5□□□□□ -1.61
RNF144AP50876 AC100757.1-201ENST00000616872 1835 ntBASIC5□□□□□ -1.61
RNF144AP50876 AL138820.1-201ENST00000617901 5305 ntBASIC5□□□□□ -1.61
RNF144AP50876 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5□□□□□ -1.61
RNF144AP50876 RNU6-968P-201ENST00000384076 107 ntBASIC5□□□□□ -1.61
RNF144AP50876 RNU6-178P-201ENST00000384631 104 ntBASIC5□□□□□ -1.61
RNF144AP50876 MIR32-201ENST00000384965 70 ntBASIC5□□□□□ -1.61
RNF144AP50876 MIR551A-201ENST00000385042 96 ntBASIC5□□□□□ -1.61
RNF144AP50876 SNORA48.4-201ENST00000391089 134 ntBASIC5□□□□□ -1.61
RNF144AP50876 AL390729.2-201ENST00000416137 156 ntBASIC5□□□□□ -1.61
RNF144AP50876 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5□□□□□ -1.61
RNF144AP50876 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5□□□□□ -1.61
RNF144AP50876 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5□□□□□ -1.61
RNF144AP50876 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 POLR2KP2-201ENST00000438155 177 ntBASIC5□□□□□ -1.61
RNF144AP50876 AL590399.6-201ENST00000446396 307 ntBASIC5□□□□□ -1.61
RNF144AP50876 MRPS10P1-201ENST00000448483 130 ntBASIC5□□□□□ -1.61
RNF144AP50876 AL353705.4-201ENST00000449661 238 ntBASIC5□□□□□ -1.61
RNF144AP50876 AC005532.2-201ENST00000467154 373 ntBASIC5□□□□□ -1.61
RNF144AP50876 AC023424.1-201ENST00000496058 459 ntBASIC5□□□□□ -1.61
RNF144AP50876 AC091912.1-201ENST00000511351 248 ntBASIC5□□□□□ -1.61
RNF144AP50876 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5□□□□□ -1.61
RNF144AP50876 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5□□□□□ -1.61
RNF144AP50876 MIR1273E-201ENST00000581165 102 ntBASIC5□□□□□ -1.61
RNF144AP50876 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 RMST_6.1-201ENST00000611980 203 ntBASIC5□□□□□ -1.61
RNF144AP50876 RNA5SP440-201ENST00000612665 119 ntBASIC5□□□□□ -1.61
RNF144AP50876 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5□□□□□ -1.61
RNF144AP50876 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RNF144AP50876 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RNF144AP50876 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5□□□□□ -1.61
RNF144AP50876 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RNF144AP50876 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF144AP50876 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF144AP50876 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF144AP50876 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF144AP50876 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF144AP50876 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF144AP50876 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF144AP50876 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF144AP50876 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF144AP50876 RNA5SP361-201ENST00000362686 118 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 Y_RNA.136-201ENST00000363444 102 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 RNU6-20P-201ENST00000384106 107 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF144AP50876 AC005522.1-201ENST00000395416 346 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 RPL23AP26-201ENST00000412728 464 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AL035461.1-201ENST00000421490 332 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF144AP50876 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF144AP50876 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF144AP50876 BTF3P6-201ENST00000448054 499 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AP000870.1-201ENST00000472927 406 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AC092754.1-201ENST00000472975 479 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 ENPP7P11-201ENST00000505915 627 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 RNA5SP362-201ENST00000516048 118 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AC021006.3-201ENST00000530771 192 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF144AP50876 AC022404.1-201ENST00000555320 273 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF144AP50876 NDUFB4P11-201ENST00000560510 395 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AC093591.2-201ENST00000565254 3843 ntBASIC4.99□□□□□ -1.61
RNF144AP50876 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms