Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.54□□□□□ -2
SSR1P43307 AL353997.4-201ENST00000586196 166 ntBASIC2.54□□□□□ -2
SSR1P43307 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.54□□□□□ -2
SSR1P43307 AP001269.3-201ENST00000588718 329 ntBASIC2.54□□□□□ -2
SSR1P43307 DPPA3P3-201ENST00000603842 430 ntBASIC2.54□□□□□ -2
SSR1P43307 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
SSR1P43307 AC018645.2-201ENST00000609151 472 ntBASIC2.54□□□□□ -2
SSR1P43307 AC010133.1-201ENST00000615809 842 ntBASIC2.54□□□□□ -2
SSR1P43307 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.54□□□□□ -2
SSR1P43307 AC006386.1-201ENST00000619436 415 ntBASIC2.54□□□□□ -2
SSR1P43307 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.54□□□□□ -2
SSR1P43307 AC112204.3-201ENST00000623822 332 ntBASIC2.54□□□□□ -2
SSR1P43307 AL159972.1-201ENST00000625150 448 ntBASIC2.54□□□□□ -2
SSR1P43307 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
SSR1P43307 RNU6-884P-201ENST00000363889 107 ntBASIC2.53□□□□□ -2
SSR1P43307 AC119751.3-201ENST00000399720 670 ntBASIC2.53□□□□□ -2
SSR1P43307 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
SSR1P43307 AC023141.4-201ENST00000412031 328 ntBASIC2.53□□□□□ -2
SSR1P43307 AC092047.1-201ENST00000424997 240 ntBASIC2.53□□□□□ -2
SSR1P43307 MTCO2P20-201ENST00000437339 673 ntBASIC2.53□□□□□ -2
SSR1P43307 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.53□□□□□ -2
SSR1P43307 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.53□□□□□ -2
SSR1P43307 AL358794.1-201ENST00000445689 381 ntBASIC2.53□□□□□ -2
SSR1P43307 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2
SSR1P43307 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.53□□□□□ -2
SSR1P43307 AC105252.1-201ENST00000503089 286 ntBASIC2.53□□□□□ -2
SSR1P43307 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
SSR1P43307 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
SSR1P43307 RNA5SP148-201ENST00000516527 94 ntBASIC2.53□□□□□ -2
SSR1P43307 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.53□□□□□ -2
SSR1P43307 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
SSR1P43307 AC087465.1-201ENST00000560574 245 ntBASIC2.53□□□□□ -2
SSR1P43307 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.53□□□□□ -2
SSR1P43307 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.53□□□□□ -2
SSR1P43307 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.53□□□□□ -2
SSR1P43307 AF038458.1-201ENST00000588406 262 ntBASIC2.53□□□□□ -2
SSR1P43307 AC002545.1-201ENST00000592511 181 ntBASIC2.53□□□□□ -2
SSR1P43307 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.53□□□□□ -2
SSR1P43307 AC021171.1-201ENST00000603137 706 ntBASIC2.53□□□□□ -2
SSR1P43307 AC080013.3-201ENST00000606839 578 ntBASIC2.53□□□□□ -2
SSR1P43307 AC245297.2-201ENST00000610119 565 ntBASIC2.53□□□□□ -2
SSR1P43307 AL161423.1-201ENST00000613700 262 ntBASIC2.53□□□□□ -2
SSR1P43307 TUG1_2.1-201ENST00000614234 87 ntBASIC2.53□□□□□ -2
SSR1P43307 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
SSR1P43307 MIR6817-201ENST00000615588 66 ntBASIC2.53□□□□□ -2
SSR1P43307 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.53□□□□□ -2
SSR1P43307 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.53□□□□□ -2
SSR1P43307 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SSR1P43307 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
SSR1P43307 AL390862.1-201ENST00000635467 1469 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC011477.1-204ENST00000623416 1325 ntBASIC2.52□□□□□ -2.01
SSR1P43307 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
SSR1P43307 RNU6-217P-201ENST00000384164 104 ntBASIC2.52□□□□□ -2.01
SSR1P43307 Y_RNA.465-201ENST00000384293 102 ntBASIC2.52□□□□□ -2.01
SSR1P43307 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 NUP35P1-201ENST00000422734 947 ntBASIC2.52□□□□□ -2.01
SSR1P43307 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.52□□□□□ -2.01
SSR1P43307 AL109933.2-201ENST00000452651 260 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 USP9YP25-201ENST00000457708 443 ntBASIC2.52□□□□□ -2.01
SSR1P43307 MRPS17P3-201ENST00000465453 385 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.52□□□□□ -2.01
SSR1P43307 AC112673.1-201ENST00000513168 575 ntBASIC2.52□□□□□ -2.01
SSR1P43307 MTCYBP43-201ENST00000513621 740 ntBASIC2.52□□□□□ -2.01
SSR1P43307 RNU6-390P-201ENST00000516259 103 ntBASIC2.52□□□□□ -2.01
SSR1P43307 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.52□□□□□ -2.01
SSR1P43307 AC025755.1-201ENST00000521306 278 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC023538.1-201ENST00000534576 736 ntBASIC2.52□□□□□ -2.01
SSR1P43307 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 AC135628.1-201ENST00000568867 534 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.52□□□□□ -2.01
SSR1P43307 AC060771.1-201ENST00000582031 164 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC136601.2-201ENST00000604356 474 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AL450336.1-201ENST00000605180 586 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AP001486.3-201ENST00000615334 372 ntBASIC2.52□□□□□ -2.01
SSR1P43307 AC010608.3-201ENST00000625048 527 ntBASIC2.52□□□□□ -2.01
SSR1P43307 MTND1P37-201ENST00000636562 264 ntBASIC2.52□□□□□ -2.01
SSR1P43307 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.52□□□□□ -2.01
SSR1P43307 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SSR1P43307 RNU6-525P-201ENST00000363685 104 ntBASIC2.51□□□□□ -2.01
SSR1P43307 RNA5SP68-201ENST00000363885 119 ntBASIC2.51□□□□□ -2.01
SSR1P43307 RNU6-359P-201ENST00000365466 108 ntBASIC2.51□□□□□ -2.01
SSR1P43307 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SSR1P43307 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
SSR1P43307 HMGB3P2-201ENST00000411913 584 ntBASIC2.51□□□□□ -2.01
SSR1P43307 MTCYBP38-201ENST00000417160 1123 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AL451054.2-201ENST00000420896 202 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.51□□□□□ -2.01
SSR1P43307 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.51□□□□□ -2.01
SSR1P43307 RNA5SP233-201ENST00000459153 113 ntBASIC2.51□□□□□ -2.01
SSR1P43307 LINC00888-204ENST00000487386 421 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.51□□□□□ -2.01
SSR1P43307 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
SSR1P43307 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.51□□□□□ -2.01
SSR1P43307 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
SSR1P43307 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.51□□□□□ -2.01
SSR1P43307 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms