Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL359198.2-201ENST00000611836 194 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.97□□□□□ -1.93
CTNNA1P35221 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.97□□□□□ -1.93
CTNNA1P35221 AC011939.3-201ENST00000613686 466 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 AP002791.1-201ENST00000623291 381 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 AC068787.1-201ENST00000623908 691 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 AC092593.1-201ENST00000515413 1815 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTNNA1P35221 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
CTNNA1P35221 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTNNA1P35221 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CTNNA1P35221 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CTNNA1P35221 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CTNNA1P35221 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTNNA1P35221 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTNNA1P35221 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.96□□□□□ -1.94
CTNNA1P35221 AL391994.1-201ENST00000254724 282 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 Y_RNA.46-201ENST00000362695 102 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 RNU6-658P-201ENST00000384606 106 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 SNORA48.7-201ENST00000391302 135 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTNNA1P35221 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 NIPA2P5-201ENST00000452282 464 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 MTCO1P42-201ENST00000457379 726 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 RPL7P49-201ENST00000471402 708 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 TRBV1-201ENST00000476502 284 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC026801.1-201ENST00000497178 464 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC109329.2-201ENST00000519658 482 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 HPRT1P3-201ENST00000539521 576 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.96□□□□□ -1.94
CTNNA1P35221 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 KC877982.1-201ENST00000602313 470 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC007619.2-201ENST00000605743 379 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC107214.2-201ENST00000608204 634 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.96□□□□□ -1.94
CTNNA1P35221 MIR3651-201ENST00000630427 90 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.96□□□□□ -1.94
CTNNA1P35221 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.96□□□□□ -1.94
CTNNA1P35221 MAPK10-266ENST00000641066 6555 ntBASIC2.96□□□□□ -1.94
CTNNA1P35221 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CTNNA1P35221 RNA5SP374-201ENST00000362939 125 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 SNORD113-6-201ENST00000363345 75 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 RNU6-701P-201ENST00000384059 107 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.95□□□□□ -1.94
CTNNA1P35221 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.95□□□□□ -1.94
CTNNA1P35221 RPS24P13-201ENST00000442520 397 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 NEFMP1-201ENST00000443423 1006 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 Z73417.1-201ENST00000447373 778 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.95□□□□□ -1.94
CTNNA1P35221 MTATP6P7-201ENST00000453315 681 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AC008571.1-201ENST00000467232 300 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.95□□□□□ -1.94
CTNNA1P35221 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.95□□□□□ -1.94
CTNNA1P35221 RNU6-826P-201ENST00000516827 104 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 SNORD19.2-201ENST00000516978 73 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AP006587.4-201ENST00000526053 529 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CTNNA1P35221 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.95□□□□□ -1.94
CTNNA1P35221 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.95□□□□□ -1.94
CTNNA1P35221 MIR4999-201ENST00000585029 91 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AL391813.1-201ENST00000603098 260 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AP000811.1-201ENST00000603803 651 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 AC005046.1-201ENST00000608515 625 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 OR8B1P-202ENST00000641132 1178 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.95□□□□□ -1.94
CTNNA1P35221 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.95□□□□□ -1.94
CTNNA1P35221 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CTNNA1P35221 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 SNORA38.1-201ENST00000364172 131 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 RN7SKP27-201ENST00000410684 333 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 RNU6-1328P-201ENST00000410938 106 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.94□□□□□ -1.94
CTNNA1P35221 RPL22P18-201ENST00000417197 377 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 SEPT2P1-201ENST00000419651 180 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 MRPL50P4-201ENST00000446432 475 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.94□□□□□ -1.94
CTNNA1P35221 RNU7-26P-201ENST00000458980 63 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 RBM43P1-201ENST00000476891 1081 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 AC072039.1-201ENST00000477611 581 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 BTF3P12-201ENST00000519620 469 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.94□□□□□ -1.94
CTNNA1P35221 AC018714.1-201ENST00000605028 208 ntBASIC2.94□□□□□ -1.94
CTNNA1P35221 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms