Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RN7SKP140-201ENST00000411196 284 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.43□□□□□ -2.02
SHMT2P34897 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
SHMT2P34897 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 LARP1BP3-201ENST00000437229 869 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.43□□□□□ -2.02
SHMT2P34897 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 OR6C5P-201ENST00000452388 923 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 snoU13.28-201ENST00000459235 104 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 RPS20P22-201ENST00000473700 357 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 RPS15AP36-201ENST00000492022 382 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 LTV1P1-201ENST00000510683 1237 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 HMGN1P28-201ENST00000521340 364 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.43□□□□□ -2.02
SHMT2P34897 AP004247.1-201ENST00000531556 1289 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AL133153.1-201ENST00000557756 303 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.43□□□□□ -2.02
SHMT2P34897 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.43□□□□□ -2.02
SHMT2P34897 BNIP3P23-201ENST00000599655 511 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AC007621.1-201ENST00000604544 437 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.43□□□□□ -2.02
SHMT2P34897 SDR42E1P2-201ENST00000614861 481 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
SHMT2P34897 AP000676.3-201ENST00000623299 569 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 AC112204.3-201ENST00000623822 332 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SHMT2P34897 MTND4P16-201ENST00000466108 1367 ntBASIC2.43□□□□□ -2.02
SHMT2P34897 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SHMT2P34897 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.43□□□□□ -2.02
SHMT2P34897 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHMT2P34897 RNU6-223P-201ENST00000362830 107 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 U3.12-201ENST00000364498 214 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 TXNP7-201ENST00000406296 293 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.42□□□□□ -2.02
SHMT2P34897 AL513477.1-202ENST00000417061 214 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC099548.1-201ENST00000421443 426 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC092047.1-201ENST00000424997 240 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.42□□□□□ -2.02
SHMT2P34897 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AL606662.1-201ENST00000445763 553 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AP1S2P1-201ENST00000457344 379 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC008481.1-201ENST00000463278 396 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 RPL23AP45-201ENST00000476406 468 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 RAC1P5-201ENST00000512182 576 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHMT2P34897 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHMT2P34897 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHMT2P34897 AC009097.3-201ENST00000563557 1018 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.42□□□□□ -2.02
SHMT2P34897 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHMT2P34897 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 MIR4999-201ENST00000585029 91 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC010620.2-201ENST00000600135 313 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC234772.3-201ENST00000602277 528 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC079089.3-201ENST00000603094 673 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC105148.1-201ENST00000604961 409 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC018714.1-201ENST00000605028 208 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AC073308.1-201ENST00000623696 305 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC110079.1-202ENST00000635213 138 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.42□□□□□ -2.02
SHMT2P34897 AC022336.2-201ENST00000568966 2538 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 CCT4P2-201ENST00000233836 1548 ntBASIC2.42□□□□□ -2.02
SHMT2P34897 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.42□□□□□ -2.02
SHMT2P34897 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
SHMT2P34897 AC092125.1-201ENST00000562568 1995 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
SHMT2P34897 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHMT2P34897 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHMT2P34897 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 AL513331.1-201ENST00000411908 397 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 MTND1P20-201ENST00000430341 950 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 AL714022.1-201ENST00000439897 151 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.41□□□□□ -2.02
SHMT2P34897 PIGFP3-201ENST00000441918 722 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 MTCYBP3-201ENST00000445588 1137 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 AL513328.1-201ENST00000446460 224 ntBASIC2.41□□□□□ -2.02
SHMT2P34897 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.41□□□□□ -2.02
SHMT2P34897 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms