Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CIITAP33076 CR848007.1-201ENST00000442354 1699 ntBASIC3.71□□□□□ -1.82
CIITAP33076 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CIITAP33076 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CIITAP33076 Y_RNA.89-201ENST00000363031 102 ntBASIC3.7□□□□□ -1.82
CIITAP33076 RNU6-525P-201ENST00000363685 104 ntBASIC3.7□□□□□ -1.82
CIITAP33076 Y_RNA.381-201ENST00000365666 102 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CIITAP33076 U3.19-201ENST00000390893 196 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.7□□□□□ -1.82
CIITAP33076 MTATP6P18-201ENST00000417994 673 ntBASIC3.7□□□□□ -1.82
CIITAP33076 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
CIITAP33076 BEND7P1-201ENST00000422058 457 ntBASIC3.7□□□□□ -1.82
CIITAP33076 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC119618.1-201ENST00000434191 222 ntBASIC3.7□□□□□ -1.82
CIITAP33076 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AL671855.1-201ENST00000446875 1203 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.7□□□□□ -1.82
CIITAP33076 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
CIITAP33076 FDX1P2-201ENST00000450769 375 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.7□□□□□ -1.82
CIITAP33076 MTND1P9-201ENST00000453775 944 ntBASIC3.7□□□□□ -1.82
CIITAP33076 RNU6-420P-201ENST00000458780 107 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC074344.1-201ENST00000512823 224 ntBASIC3.7□□□□□ -1.82
CIITAP33076 RNU6-798P-201ENST00000516912 103 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC103783.1-201ENST00000520506 373 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC118273.2-201ENST00000532092 465 ntBASIC3.7□□□□□ -1.82
CIITAP33076 SNRPGP16-201ENST00000533275 226 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.7□□□□□ -1.82
CIITAP33076 SYF2P1-201ENST00000550658 413 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AL133153.1-201ENST00000557756 303 ntBASIC3.7□□□□□ -1.82
CIITAP33076 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.7□□□□□ -1.82
CIITAP33076 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
CIITAP33076 OR4K8P-201ENST00000578842 1048 ntBASIC3.7□□□□□ -1.82
CIITAP33076 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
CIITAP33076 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.7□□□□□ -1.82
CIITAP33076 AC011451.2-201ENST00000604303 598 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AL162713.1-201ENST00000604480 262 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC007038.2-201ENST00000608095 740 ntBASIC3.7□□□□□ -1.82
CIITAP33076 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.7□□□□□ -1.82
CIITAP33076 AC006338.1-201ENST00000618453 749 ntBASIC3.7□□□□□ -1.82
CIITAP33076 AC099654.14-201ENST00000638599 341 ntBASIC3.7□□□□□ -1.82
CIITAP33076 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CIITAP33076 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CIITAP33076 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
CIITAP33076 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CIITAP33076 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CIITAP33076 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-511P-201ENST00000363496 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-1078P-201ENST00000364522 103 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-108P-201ENST00000365558 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CIITAP33076 AP002088.1-201ENST00000382740 395 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-74P-201ENST00000384235 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-39P-201ENST00000384344 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-456P-201ENST00000384493 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 FGF7P8-201ENST00000402994 292 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU6-908P-201ENST00000410160 94 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RNU4-47P-201ENST00000410876 114 ntBASIC3.69□□□□□ -1.82
CIITAP33076 CCDC58P2-201ENST00000417131 366 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RPL30P16-201ENST00000419341 429 ntBASIC3.69□□□□□ -1.82
CIITAP33076 ELOCP4-201ENST00000420090 333 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AL109913.1-201ENST00000421173 514 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.69□□□□□ -1.82
CIITAP33076 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.69□□□□□ -1.82
CIITAP33076 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.69□□□□□ -1.82
CIITAP33076 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.69□□□□□ -1.82
CIITAP33076 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.69□□□□□ -1.82
CIITAP33076 ELOCP23-201ENST00000452014 332 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC010401.1-201ENST00000463867 348 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RPL31P58-201ENST00000469001 379 ntBASIC3.69□□□□□ -1.82
CIITAP33076 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.69□□□□□ -1.82
CIITAP33076 PHBP14-201ENST00000512887 367 ntBASIC3.69□□□□□ -1.82
CIITAP33076 SNORA31.8-201ENST00000516327 108 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC109635.3-201ENST00000529536 185 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AP000857.1-201ENST00000532151 543 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
CIITAP33076 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.69□□□□□ -1.82
CIITAP33076 AL512310.1-201ENST00000548639 172 ntBASIC3.69□□□□□ -1.82
CIITAP33076 FAM60BP-201ENST00000578364 658 ntBASIC3.69□□□□□ -1.82
CIITAP33076 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.69□□□□□ -1.82
CIITAP33076 COX6CP3-201ENST00000580869 223 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.69□□□□□ -1.82
CIITAP33076 AC012507.3-201ENST00000603556 477 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC008536.2-201ENST00000607284 349 ntBASIC3.69□□□□□ -1.82
CIITAP33076 RMST_8.1-201ENST00000610287 165 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AL157817.1-201ENST00000614264 790 ntBASIC3.69□□□□□ -1.82
CIITAP33076 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.69□□□□□ -1.82
CIITAP33076 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CIITAP33076 RIOK3P1-201ENST00000418778 1528 ntBASIC3.69□□□□□ -1.82
CIITAP33076 AC073346.2-201ENST00000624724 2058 ntBASIC3.69□□□□□ -1.82
CIITAP33076 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CIITAP33076 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
CIITAP33076 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CIITAP33076 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CIITAP33076 Y_RNA.22-201ENST00000362492 102 ntBASIC3.68□□□□□ -1.82
CIITAP33076 Y_RNA.38-201ENST00000362617 102 ntBASIC3.68□□□□□ -1.82
CIITAP33076 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CIITAP33076 MIR135A2-201ENST00000384854 100 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms