Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 HMGB1P36-201ENST00000487709 576 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 MTCYBP35-201ENST00000503630 1137 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.45□□□□□ -2.02
HOXA9P31269 AC093281.2-201ENST00000510153 597 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXA9P31269 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA9P31269 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
HOXA9P31269 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA9P31269 RN7SKP287-201ENST00000516546 266 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA9P31269 CR383656.7-201ENST00000548164 174 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA9P31269 OR4K8P-201ENST00000578842 1048 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXA9P31269 AC022022.2-201ENST00000602989 360 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC093424.1-201ENST00000604999 338 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC004852.3-201ENST00000614131 326 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXA9P31269 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 AC131280.1-202ENST00000624067 4211 ntBASIC2.45□□□□□ -2.02
HOXA9P31269 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXA9P31269 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HOXA9P31269 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA9P31269 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXA9P31269 TPTE2P4-201ENST00000258589 1605 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HOXA9P31269 SNORD114-1-201ENST00000362705 72 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA9P31269 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA9P31269 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 AL136372.1-201ENST00000403060 228 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 HIGD1AP15-201ENST00000416198 280 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA9P31269 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXA9P31269 AL117351.1-201ENST00000438864 766 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 SDCBPP1-201ENST00000440192 890 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AL591719.1-201ENST00000444669 744 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 MEMO1P3-201ENST00000459811 302 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC073901.1-201ENST00000462471 408 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 RPL30P9-201ENST00000465586 330 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA9P31269 RPS27P26-201ENST00000494583 239 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC107222.1-201ENST00000510899 637 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC113155.1-201ENST00000511141 769 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA9P31269 SNORA70.16-201ENST00000516390 95 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 HSPE1P18-201ENST00000517602 280 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.44□□□□□ -2.02
HOXA9P31269 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HOXA9P31269 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXA9P31269 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXA9P31269 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXA9P31269 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 AL354943.1-201ENST00000572103 781 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXA9P31269 AC060766.3-201ENST00000591442 263 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 TPMTP1-201ENST00000592307 737 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AL596327.1-201ENST00000603629 213 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AL355816.2-201ENST00000610049 647 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 AC021755.4-201ENST00000616620 456 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 UCA1.1-201ENST00000620952 75 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HOXA9P31269 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXA9P31269 DDX43P2-201ENST00000604753 1354 ntBASIC2.44□□□□□ -2.02
HOXA9P31269 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HOXA9P31269 AC011477.1-204ENST00000623416 1325 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA9P31269 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA9P31269 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXA9P31269 RNU6-433P-201ENST00000363216 104 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 RNU6-931P-201ENST00000363850 107 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 RNU6-289P-201ENST00000364093 107 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AL079342.1-201ENST00000401460 267 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC234781.2-201ENST00000426370 994 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXA9P31269 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA9P31269 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 MTCO1P27-201ENST00000448269 226 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 RBM43P1-201ENST00000476891 1081 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 RPL31P41-201ENST00000477967 372 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 RPL9P6-201ENST00000492764 598 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXA9P31269 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXA9P31269 OR6C7P-201ENST00000547875 934 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXA9P31269 AC105137.2-201ENST00000569073 466 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AC090616.3-201ENST00000582184 217 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXA9P31269 MIR4999-201ENST00000585029 91 ntBASIC2.43□□□□□ -2.02
HOXA9P31269 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms