Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 KLF3P2-201ENST00000465138 268 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 DYNLL1P5-201ENST00000467158 270 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC072039.1-201ENST00000477611 581 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC109486.1-201ENST00000486833 374 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC108729.1-201ENST00000487812 947 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC022493.1-201ENST00000492984 337 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC098591.2-201ENST00000510152 315 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC079395.1-201ENST00000510981 262 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC116353.3-201ENST00000511215 249 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC118465.1-201ENST00000513820 1271 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 RN7SKP132-201ENST00000516001 208 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 SCARNA3-201ENST00000517097 143 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AL138976.2-201ENST00000563989 694 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC011451.2-201ENST00000604303 598 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 FTX_3.1-201ENST00000610451 147 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 MIR1291-201ENST00000627649 87 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AL137790.1-201ENST00000634283 177 ntBASIC1.95□□□□□ -2.1
HLA-DMAP28067 AC005539.1-201ENST00000443768 1479 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMAP28067 RNU6-525P-201ENST00000363685 104 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 Y_RNA.311-201ENST00000365068 96 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL359511.1-201ENST00000402970 211 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 MIR1284-201ENST00000408337 120 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 RNU2-49P-201ENST00000410666 184 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL953862.1-201ENST00000423016 168 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC008850.1-201ENST00000427546 362 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 UBE2FP3-201ENST00000436366 524 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL117351.1-201ENST00000438864 766 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 EEF1A1P39-201ENST00000440791 250 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC007327.1-201ENST00000447461 264 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 ARPC3P5-201ENST00000448802 534 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL009048.1-201ENST00000450437 298 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 FCF1P6-201ENST00000456841 595 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 snoU13.8-201ENST00000458890 104 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 snoU109.3-201ENST00000459477 145 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 S100A11P2-201ENST00000467589 312 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC134050.1-201ENST00000495088 933 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC022447.3-201ENST00000506865 495 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 ANP32BP3-201ENST00000559213 706 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AP001269.3-201ENST00000588718 329 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 VN1R90P-201ENST00000595717 726 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 BNIP3P33-201ENST00000598912 569 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 RNU4-5P-201ENST00000607255 135 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AC013476.2-201ENST00000614456 459 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 AL162373.1-201ENST00000620433 407 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
HLA-DMAP28067 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMAP28067 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMAP28067 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 MTCO1P9-201ENST00000505577 1534 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 ZNF29P-201ENST00000225587 168 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RNA5SP68-201ENST00000363885 119 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RNU6-621P-201ENST00000364752 109 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RNU6-140P-201ENST00000384566 108 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 MIR518C-201ENST00000384822 101 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 MIR620-201ENST00000385232 95 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RNU2-33P-201ENST00000410344 192 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 MTATP6P20-201ENST00000414147 562 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 MTCO2P23-201ENST00000425216 680 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 RPS25P9-201ENST00000435591 252 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 COX7BP2-201ENST00000437976 242 ntBASIC1.93□□□□□ -2.1
HLA-DMAP28067 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.93□□□□□ -2.1
HLA-DMAP28067 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms