Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MRPS17P3-201ENST00000465453 385 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC078785.3-201ENST00000476607 425 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.96□□□□□ -1.77
POLR2AP24928 AC104057.1-201ENST00000515547 497 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 RNU6-27P-201ENST00000516146 107 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.96□□□□□ -1.77
POLR2AP24928 COPS8P3-201ENST00000526024 482 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.96□□□□□ -1.77
POLR2AP24928 UBE2L4-201ENST00000587688 464 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.96□□□□□ -1.77
POLR2AP24928 AL132822.1-201ENST00000617063 513 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC011155.2-201ENST00000623202 216 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AC244517.12-201ENST00000623581 663 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 AL359757.2-201ENST00000624309 274 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 MTND5P42-201ENST00000637720 498 ntBASIC3.96□□□□□ -1.77
POLR2AP24928 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
POLR2AP24928 AP001350.1-201ENST00000601906 1524 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
POLR2AP24928 Y_RNA.193-201ENST00000363979 102 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 AF228730.2-201ENST00000438784 848 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 RPS15AP27-201ENST00000449183 343 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 SNORD19B-201ENST00000459623 84 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 RPS27AP1-201ENST00000475545 471 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 RPL7P43-201ENST00000478876 753 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.96□□□□□ -1.78
POLR2AP24928 AC093767.1-201ENST00000504523 156 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 Y_RNA.665-201ENST00000516177 98 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 RNU6-835P-201ENST00000516974 104 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.96□□□□□ -1.78
POLR2AP24928 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.96□□□□□ -1.78
POLR2AP24928 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.96□□□□□ -1.78
POLR2AP24928 GLUD1P4-201ENST00000590914 418 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 PSMA6P4-201ENST00000603247 718 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 AP001330.4-201ENST00000604350 154 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2AP24928 RMST_9.1-201ENST00000619945 193 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 AC100810.6-201ENST00000638068 285 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 AC093775.1-201ENST00000624154 1868 ntBASIC3.96□□□□□ -1.78
POLR2AP24928 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2AP24928 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2AP24928 AL138713.1-201ENST00000624026 2130 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2AP24928 Y_RNA.184-201ENST00000363884 108 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 Y_RNA.422-201ENST00000384054 114 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 RNU6-474P-201ENST00000384243 107 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 AL138885.1-201ENST00000405921 675 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 RN7SKP284-201ENST00000411002 343 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 RPL31P2-201ENST00000413849 377 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2AP24928 SRIP2-201ENST00000428470 166 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AL353705.1-201ENST00000433468 480 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.95□□□□□ -1.78
POLR2AP24928 Y_RNA.653-201ENST00000459091 95 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2AP24928 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2AP24928 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2AP24928 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2AP24928 AC012182.1-201ENST00000570133 895 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2AP24928 AC100830.2-201ENST00000581636 240 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC060771.1-201ENST00000582031 164 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AL080274.1-201ENST00000605565 220 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 MIR7106-201ENST00000612419 65 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 AL158196.1-201ENST00000616786 434 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 AC091953.2-201ENST00000623979 160 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 AC233263.6-201ENST00000631132 1963 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2AP24928 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2AP24928 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2AP24928 MTCO1P9-201ENST00000505577 1534 ntBASIC3.95□□□□□ -1.78
POLR2AP24928 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2AP24928 RNU1-108P-201ENST00000362556 161 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RNA5SP258-201ENST00000362750 119 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
POLR2AP24928 AL023807.1-201ENST00000407932 359 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 RPL7P10-201ENST00000417407 739 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.94□□□□□ -1.78
POLR2AP24928 RPL23AP30-201ENST00000432419 501 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AL357552.1-201ENST00000445254 415 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC104563.1-201ENST00000476147 376 ntBASIC3.94□□□□□ -1.78
POLR2AP24928 AC091885.1-201ENST00000506658 268 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms