Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC022616.6-201ENST00000520479 119 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 AC008751.2-201ENST00000597885 980 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
BDNFP23560 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.33□□□□□ -1.88
BDNFP23560 AC034229.4-201ENST00000607861 441 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.33□□□□□ -1.88
BDNFP23560 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AC068057.2-201ENST00000624047 895 ntBASIC3.33□□□□□ -1.88
BDNFP23560 TEX21P-201ENST00000447107 1476 ntBASIC3.33□□□□□ -1.88
BDNFP23560 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.33□□□□□ -1.88
BDNFP23560 AC004944.1-201ENST00000517807 3059 ntBASIC3.33□□□□□ -1.88
BDNFP23560 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.32□□□□□ -1.88
BDNFP23560 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BDNFP23560 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
BDNFP23560 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BDNFP23560 SNORD115.1-201ENST00000391109 76 ntBASIC3.32□□□□□ -1.88
BDNFP23560 Z92545.1-201ENST00000411782 234 ntBASIC3.32□□□□□ -1.88
BDNFP23560 SSXP1-201ENST00000453640 473 ntBASIC3.32□□□□□ -1.88
BDNFP23560 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
BDNFP23560 GZMAP1-201ENST00000503054 631 ntBASIC3.32□□□□□ -1.88
BDNFP23560 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BDNFP23560 RNU6-703P-201ENST00000516946 107 ntBASIC3.32□□□□□ -1.88
BDNFP23560 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
BDNFP23560 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.32□□□□□ -1.88
BDNFP23560 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.32□□□□□ -1.88
BDNFP23560 AC123904.2-201ENST00000548059 300 ntBASIC3.32□□□□□ -1.88
BDNFP23560 AC021739.1-201ENST00000559631 174 ntBASIC3.32□□□□□ -1.88
BDNFP23560 AC091489.2-201ENST00000566263 604 ntBASIC3.32□□□□□ -1.88
BDNFP23560 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
BDNFP23560 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.32□□□□□ -1.88
BDNFP23560 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.32□□□□□ -1.88
BDNFP23560 AC023510.2-201ENST00000622162 746 ntBASIC3.32□□□□□ -1.88
BDNFP23560 AC007671.2-201ENST00000637344 619 ntBASIC3.32□□□□□ -1.88
BDNFP23560 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.32□□□□□ -1.88
BDNFP23560 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.32□□□□□ -1.88
BDNFP23560 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BDNFP23560 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
BDNFP23560 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BDNFP23560 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BDNFP23560 MTND4P35-201ENST00000604257 1375 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
BDNFP23560 GNG5P1-201ENST00000255500 204 ntBASIC3.31□□□□□ -1.88
BDNFP23560 MIR422A-201ENST00000362286 90 ntBASIC3.31□□□□□ -1.88
BDNFP23560 RNU6-500P-201ENST00000362349 107 ntBASIC3.31□□□□□ -1.88
BDNFP23560 RNU5F-7P-201ENST00000363696 115 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AL356057.2-201ENST00000403318 432 ntBASIC3.31□□□□□ -1.88
BDNFP23560 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
BDNFP23560 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AC019097.1-201ENST00000424783 735 ntBASIC3.31□□□□□ -1.88
BDNFP23560 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AC118469.1-201ENST00000442943 488 ntBASIC3.31□□□□□ -1.88
BDNFP23560 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.31□□□□□ -1.88
BDNFP23560 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.31□□□□□ -1.88
BDNFP23560 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.31□□□□□ -1.88
BDNFP23560 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.31□□□□□ -1.88
BDNFP23560 AC008885.1-201ENST00000514930 301 ntBASIC3.31□□□□□ -1.88
BDNFP23560 SCARNA17.1-201ENST00000516211 143 ntBASIC3.31□□□□□ -1.88
BDNFP23560 SCARNA17.2-201ENST00000516334 143 ntBASIC3.31□□□□□ -1.88
BDNFP23560 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.31□□□□□ -1.88
BDNFP23560 MTCYBP22-201ENST00000603788 447 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AL160281.1-201ENST00000605307 311 ntBASIC3.31□□□□□ -1.88
BDNFP23560 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.31□□□□□ -1.88
BDNFP23560 uc_338.14-201ENST00000613162 166 ntBASIC3.31□□□□□ -1.88
BDNFP23560 SCARNA17.4-201ENST00000614296 143 ntBASIC3.31□□□□□ -1.88
BDNFP23560 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.31□□□□□ -1.88
BDNFP23560 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.31□□□□□ -1.88
BDNFP23560 AL161431.1-201ENST00000618966 4205 ntBASIC3.31□□□□□ -1.88
BDNFP23560 AC004972.1-201ENST00000623934 2209 ntBASIC3.31□□□□□ -1.88
BDNFP23560 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BDNFP23560 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BDNFP23560 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BDNFP23560 MTND4P27-201ENST00000450813 1354 ntBASIC3.3□□□□□ -1.88
BDNFP23560 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
BDNFP23560 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.3□□□□□ -1.88
BDNFP23560 RNU6-533P-201ENST00000384144 107 ntBASIC3.3□□□□□ -1.88
BDNFP23560 SNORD15B-201ENST00000384714 146 ntBASIC3.3□□□□□ -1.88
BDNFP23560 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
BDNFP23560 MRPL42P2-201ENST00000403169 426 ntBASIC3.3□□□□□ -1.88
BDNFP23560 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.3□□□□□ -1.88
BDNFP23560 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.3□□□□□ -1.88
BDNFP23560 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.3□□□□□ -1.88
BDNFP23560 AC107626.1-201ENST00000471084 183 ntBASIC3.3□□□□□ -1.88
BDNFP23560 NDUFB4P2-201ENST00000509515 391 ntBASIC3.3□□□□□ -1.88
BDNFP23560 RNU6-1092P-201ENST00000516955 87 ntBASIC3.3□□□□□ -1.88
BDNFP23560 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.3□□□□□ -1.88
BDNFP23560 AP001372.4-201ENST00000524889 472 ntBASIC3.3□□□□□ -1.88
BDNFP23560 OR5BN1P-201ENST00000532955 829 ntBASIC3.3□□□□□ -1.88
BDNFP23560 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.3□□□□□ -1.88
BDNFP23560 MIR3167-201ENST00000579623 85 ntBASIC3.3□□□□□ -1.88
BDNFP23560 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.3□□□□□ -1.88
BDNFP23560 AL365204.3-201ENST00000612448 685 ntBASIC3.3□□□□□ -1.88
BDNFP23560 MIR7844-201ENST00000616161 122 ntBASIC3.3□□□□□ -1.88
BDNFP23560 AL589994.2-201ENST00000621124 579 ntBASIC3.3□□□□□ -1.88
BDNFP23560 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
BDNFP23560 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BDNFP23560 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms